Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0843 ATGAAGAAGGACAACAAATACCTGTTATGCTTCTTCACCATCCTCTTAGTACTACCTCTTTCCGCGGTGCAAGCCCAAAACACCAATGACGTTTCTGACCCTAACTACCAGCAGCAGTTCAACCCTTCCTTAGCCATCATCATCGTTATTTTAATCGCCGCTCTTTTCCTCATGGGCTTCTTCTCCATCTACATCCGCCACTGCGCCGATTCCCCCTCCGCTTCCGTCCTCCCCACCACCGGCGCCGCCGGAAGATCCAGGAGGGCCTCGCGCGGCCTGGACCCTGCCGTCATCGAGACCTTCCCCATCCTGGAGTACTCTGAGGTCAAGATCCACAAGATCGGAAAAGAGGTGCTGGAATGCGCCGTGTGTTTGTGCGAGTTCGAGGACACCGAAACGCTGCGTTTGATCCCAAAGTGCGATCACGTCTTCCACCCGGAGTGTATTGACGAGTGGCTCGCTTCACACACAACCTGCCCTGTTTGCAGAGCCAACCTCGTGCCCCAACCTGGCGAGTCTGTTCACGCGCTTCCAATCGTTCCCGACCCCGACGCGCCAGATATCGAGGCCCAAAACGACGCCGTTCAGACCGCGCCAGAACCAGAACAAGAGCAAGAACATATTAGTGCTGAGGCTAATAAGCCGGAGTCAGCAATATTGGACAAAAGTAAGACGCTGAACCGGAACCGGACGCGCGGGAGGTCGAGCCGTAGGCGGCACTTCCCACGGTCTCACTCGACCGGGCATTCGCTGATCCAACCGGGGGAGAACACGGACCGGTTCACTTTGAAACTCCCCGCGGGAGTGAGGAAGGAGATAATAAACCGGGAGTTGCAAAGGGCGAACAGCTTGCTTGTGTTGCCGAGGGAGGGAAGTTCGAGGGCTGGGTACCGAACCGGAGAGGGAAGTAGTAGGGGTAAGATTTGGAGACAGTTGAACCGGAGCTTTAAATCGGACCGGTGGGTTTTTACGATGGCCCCGCCGTTTTTGGTTCGGGGATCATCGATTAGGTCACCGAGGGTGGTGGGTAGTAATAGCGCCGGTGAAGGGACTTCTTCATCCGCCTCTGCCGCTGCCTCCGCCCCTATACTGCCGCCGACGGCCGTTGATTCCGCTCGCCCTCCCGTTTGA 1131 0.5694 MKKDNKYLLCFFTILLVLPLSAVQAQNTNDVSDPNYQQQFNPSLAIIIVILIAALFLMGFFSIYIRHCADSPSASVLPTTGAAGRSRRASRGLDPAVIETFPILEYSEVKIHKIGKEVLECAVCLCEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPQPGESVHALPIVPDPDAPDIEAQNDAVQTAPEPEQEQEHISAEANKPESAILDKSKTLNRNRTRGRSSRRRHFPRSHSTGHSLIQPGENTDRFTLKLPAGVRKEIINRELQRANSLLVLPREGSSRAGYRTGEGSSRGKIWRQLNRSFKSDRWVFTMAPPFLVRGSSIRSPRVVGSNSAGEGTSSSASAAASAPILPPTAVDSARPPV* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0843 376 MobiDBLite consensus disorder prediction 229 245 - -
Aev06g0843 376 PANTHER RING FINGER DOMAIN-CONTAINING 1 312 - -
Aev06g0843 376 SMART ring_2 121 162 IPR001841 -
Aev06g0843 376 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 312 - -
Aev06g0843 376 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Aev06g0843 376 MobiDBLite consensus disorder prediction 179 259 - -
Aev06g0843 376 MobiDBLite consensus disorder prediction 204 228 - -
Aev06g0843 376 CDD RING-H2_EL5_like 120 163 - -
Aev06g0843 376 Pfam Ring finger domain 120 163 IPR001841 -
Aev06g0843 376 SUPERFAMILY RING/U-box 120 170 - -
Aev06g0843 376 MobiDBLite consensus disorder prediction 338 360 - -
Aev06g0843 376 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 168 IPR013083 -
Aev06g0843 376 MobiDBLite consensus disorder prediction 334 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0843 Aev-Chr6 5723138 5724268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0843 9 361 Rapid Response to Elicitors AT3G05200 43.147 7.34e-91 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0843 K10664 - gmx:100781706 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0843 06 5723138 5724268 Aev06g0843 06 5723138 5724268 ECH
Aev06g0843 06 5723138 5724268 Aev09g0847 09 8766753 8767705 PCT