Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0838 ATGGCCTTCACTCTCACTCTCTCCCCTTCTTCTTCTTCCTCTTTCTCTTTCTTTTCATCACTCTCACTCATCATCACACTCCTCCTCATCTTACTCTTCTTCTTCCTAAACCCACCTCCTTCTCTTTCTCTCTTCACCCAAACCCGCCGGTCTCTTCTAACCACCACCACCACCTGCTCCTCCGCCGCATCCAATGGCGGCATCATCAACTACCTCTCCCTCCACGACTGCCTCTTCCGACGCAACTCACTCCTCTCCATCTCCTCCCTCTCCCTCCTCCTTCTCCTCCACTTCTACATCCTCATCAACACCGCTCAGCACCACTTCTCAATCGTCACCACCAAGCTCGCCTCTCACCTCAACCTCTCTCCTTCCATGGCCGCCGTTACTCTCCTAGCCCTAGGCAACGGCTCCCCCGATGTCTTCTCCTCCCTCGCCGCCCTCCGCGCTGGTCAGTACCGTACTGGCTTCGGTGCCATCCTCTCAGCCGGAACCTTCGTCTCTGCTCTCGTCGTCGGATTCGTCGCGATCTACGCCGCGCCGTTTTCCGTCGATCCCGCTCCGTTCGTGAGGGATGTGTTGTTCTACCTCACGGCGGCGATGTTCCTGTTCTACGTGTACCTCAGTGCCGAGATTTTCCTGTGGCAGGCGATTGGATTCGTAGGGTTTTATCTATTCTTCGTAGGGTTTGTGTTCTATATGGACTTGGGAGTGGGAGATCGCAGGGTGAAGGGTGGGAATGCGAACGCAGATCTTGAGGAGCAGAAGGAATCGGATGATGCGGTGGTCGATTCCGAGGTTAAGGTTTCAGGATCTGTGGAGGGTGAGAAACGCAGTCCTGGATTGCGTGGAGCTTTCGAATTGATTTCTAAAGTATGGGAACTTCCTGTCTCAACTCTTTTAAAATTGACAATCCCCCAACCGGCACCATCACAATGGAGCAGATTTTATACATCAGCCAATATAGCTCTTTGTCCGTTAGCTCTCTTGTATGCCGGCAACTCATTCGTGCCAATTGATCATCCGATTGTTTTCCTCCTCCCCAACACACATTTCCCCCTCTGGTCAGTAGTGCTCATGACAAGTTTCTCTCTTGCATTTCTTCATTATGTAATGGAAAAAGAACCTCCCAAAACCGAGCAAATGCATGTGGTCGTCATAGCATTTGTCATGAGCGTGTTTTGGATATCTACTACAGCTGCAGAACTGGTGAACTGCCTTGAAGCTCTAGGAATTCTTCTCAAGCTGCCACCTGCACTCCTCGGTCTCACGGTGCTGGCATGGGGAAATTCGGTAGGGGATCTCGTTGCCGATGTTGCAGTCGCCAAAGCTGGTCATCCAGCAATGGCAATGGCTGGATGCTTCGCTGGACCAATGTTCAACATGCTTGTTGGTCTTGGATCAGCATTGGTGATACAGACCACGAACCTTTATCCTAAAGCCTATGTGCTTAATTTCCACATTCAGAGTGCCCAGGTTCTGGGGATTCTGTCTGGTAGGCCTCTATATTGTTTTTATGGCAGTGAGTTTGGTAGTAGGCATGTTTTCAGGGTGAGGTTCCAGGTTCCAGGTTCCATACACATATATAAAGGTTCTTGCTTCTCAGCTATCGCGGAGCACAGCTTCATCTCTTTGGGAAGAATGGATCATCAAGGGCATAGCCAGAACCCACCTATGGGTGTTGTCGGTAGTGGGGCTCAACTAACGTACGGAACTAATCCGTATCAGGCTGGCCAAATGACTGGAGCACCAGGGTCAGTTGTTACGTCAGTTGGGAACATGCAATCTGCTGGACAAGCTGCTGGAGGTCAGTTGGGACAACACCAACTTGCTTATCAGCACATTCATCAGCAACAACAGCAGCAACTTCAGCAACAGCTTCAAGCCTTTTGGGCAAATCAATACCAAGAAATTGAGAAGGTAACTGATTTCAAGAACCATAGCCTCCCCCTGGCAAGGATCAAGAAGATTATGAAGGCCGATGAGGATGTTCGTATGATATCAGCTGAGGCACCGGTCATATTTGCAAGGGCGTGTGAAATGTTCATATTAGAGTTAACACTGCGTTCATGGAATCACACTGAAGAGAACAAAAGGAGAACCCTTCAGAAAAATGATATTGCTGCTGCAATCACAAGGACTGATATCTTTGATTTCCTGGTTGATATTGTGCCTCGTGAGGACTTGAAAGATGAAGTGCTTGCATCAATCCCAAGAGGAACAATGCCTGTGGCAGGGCCTGCTGATGCACTTCCTTATTGCTATATGCCACCACAACATGCACCCCAAGTTGGAACTGCTGGTGTCATAATGGGTAAGCCTGTGATGGACCCGAATATGTATGCTCAGCAATCTCATCCCTACATGGCACCGCAGATGTGGCCACAGCCACCACCGGACCAACGACCACCATCTCCAGATCATTAG 2427 0.4986 MAFTLTLSPSSSSSFSFFSSLSLIITLLLILLFFFLNPPPSLSLFTQTRRSLLTTTTTCSSAASNGGIINYLSLHDCLFRRNSLLSISSLSLLLLLHFYILINTAQHHFSIVTTKLASHLNLSPSMAAVTLLALGNGSPDVFSSLAALRAGQYRTGFGAILSAGTFVSALVVGFVAIYAAPFSVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAIGFVGFYLFFVGFVFYMDLGVGDRRVKGGNANADLEEQKESDDAVVDSEVKVSGSVEGEKRSPGLRGAFELISKVWELPVSTLLKLTIPQPAPSQWSRFYTSANIALCPLALLYAGNSFVPIDHPIVFLLPNTHFPLWSVVLMTSFSLAFLHYVMEKEPPKTEQMHVVVIAFVMSVFWISTTAAELVNCLEALGILLKLPPALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVIQTTNLYPKAYVLNFHIQSAQVLGILSGRPLYCFYGSEFGSRHVFRVRFQVPGSIHIYKGSCFSAIAEHSFISLGRMDHQGHSQNPPMGVVGSGAQLTYGTNPYQAGQMTGAPGSVVTSVGNMQSAGQAAGGQLGQHQLAYQHIHQQQQQQLQQQLQAFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHAPQVGTAGVIMGKPVMDPNMYAQQSHPYMAPQMWPQPPPDQRPPSPDH* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0838 808 Gene3D - 319 510 IPR044880 -
Aev06g0838 808 Gene3D - 122 249 IPR044880 -
Aev06g0838 808 Gene3D Histone, subunit A 610 726 IPR009072 GO:0046982
Aev06g0838 808 MobiDBLite consensus disorder prediction 789 808 - -
Aev06g0838 808 Pfam Sodium/calcium exchanger protein 91 232 IPR004837 GO:0016021|GO:0055085
Aev06g0838 808 Pfam Sodium/calcium exchanger protein 385 490 IPR004837 GO:0016021|GO:0055085
Aev06g0838 808 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 548 808 - -
Aev06g0838 808 MobiDBLite consensus disorder prediction 791 808 - -
Aev06g0838 808 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 548 808 - -
Aev06g0838 808 Pfam Core histone H2A/H2B/H3/H4 614 711 IPR007125 GO:0003677
Aev06g0838 808 SUPERFAMILY Histone-fold 619 720 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0838 Aev-Chr6 5696605 5704761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0838 22 488 Antiporters AT1G08960 66.324 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Aev06g0838 Na_Ca_ex 4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0838 K13754 - gmx:100775437 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0838 06 5696605 5704761 Aev06g0838 06 5696605 5704761 ECH