Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0827 ATGCAAGATATATTCGGATCAGTTCGGCGATCACTGGTTTTCCGTGCTTCGTCGGAGAACGAAGATCACTCGCTCGGAGGAACCCTAGTTGATAAGATCAGTTACTGCATACGCAATTCTAGAGTCTTCTCTAAACCCTCGCTCTCGCCTCCGCCGTTGCCGCCGATTCCCAAGGAGCCTACGATCCGATGGCGCAAGGGCGAGTTGATCGGCTGCGGTGCCTTTGGCCAAGTTTACGTTGGAATGAATCTCGATTCCGGAGAGCTTCTAGCAGTTAAACAGGTTTTGATTGCGGCAAGTAGCGCTTCCAAGGAGAAGGCACAGGCTCACATAAAAGAGCTCGAGGAAGAAGTTAAGCTTCTTAAAGACCTTTCACATCCCAACATTGTTAGATATCTTGGTACAGTTAGAGAGGAGGATACCTTGAATATTCTCCTCGAGTTTGTGCCTGGGGGATCTATATCATCACTACTGGGGAAGTTTGGTGCTTTCCCTGAAGCTGTCATAAGAACTTACACGAAGCAGTTACTGCTTGGACTTGAGTACTTGCATAAAAATGGAATCATGCACAGAGACATTAAGGGGGCCAATATTCTTGTAGATAATAAAGGTTGCATAAAACTTGCCGATTTTGGGGCATCCAAACAGGTCGTTGAGCTGGCTACGATTTCTGGTGCCAAGTCTATGAAGGGTACACCATATTGGATGGCTCCTGAGGTTATTCTCCAGACTGGACATAGCTTCTCTGCTGACATATGGAGCGTGGGTTGTACTGTGATTGAGATGGCCACCGGAAAGCCTCCGTGGAGTCAGCAATACCAGCAAGAGGTTGCTGCCCTCTTCCATATAGGGACAACTAAGTCTCATCCGCCAATCCCTGATCATCTCTCAAGTGGAGCAAAAGATTTTCTGCTAAAATGTTTGCAGAAGGAGCCATTTTTGAGGCCATCAGCATCAGAACTGCTACAGCATCCCTTTGTTACTGGTGAACCTATGGATTCTCTTCCTCTGTCATCTGCTGCCATGGAAAACTTTGAACCTTCTTCATCGTCATGTGCCCCAAATGTTGAACCACACCTTCGATGCTCAACTGTAAATCCTGAGGATTCTGGAAATGAACAGTTTTGGGGAACTAGCAATGATGATGATGACATGTGTATGATTGATGACAAAGATGATTTCTTGCAGAGTGATGTCAAATACAAGCCAATGATGTCAGAAAATATTGAGAGTTTCAACCCGATGTCTGATCCCTCTGATGATTGGGGGTGTAAATTTGATGCAAGTCCGGAGTTGGATAAAGGAGTCAGTTTGGGCACCAATGAAAGTTACATGTCGCCTGGTCACTCGGGGGCCAATAATAGTACGGGGCAGAAAGATTTTTCCTTTCCATGCGTGCCATCTCTGTCAGAGGAAGATGATGAACTCACAGAGTCAAAAATTCAAGCATTTTTGGATGAGAAGGCTCTTGAACTGAAAAAGTTGCAGACACCATTATATGAAGAGTTCTACAACAGTTTAAATACATCTTGTTCCCCGAATGTGATTAATTGCACAAGCGATGAAAGAGCTTCTCGAAAATACTTGAAATTGCCTCCTAAAAGTAGGTCACCGAGTCGGGCACCAATTACTCCATCTAAAGCAGTTGACAGCACTGGAAGTCCTGGCAGTAATGGCAGGTCCTCATCAACTGTTGGCAATGCAAATGATAATGGTTCACAGGACATTCCATCATCTCCCCTTAAAGAATGGAATGGACTGACTGAATCCCAGCAAGAGCCCAGTAGCCCAAGTTTAAGCTTTTCTGAGAGACAGAGGAAGTGGAAAGAAGAGCTCGACCAGGAGCTTGCAAGAAAGCGAGAAATGATGCGGCAAGCTGGGGTGGGGGGTAAAACATCTTCACCAAAGGATAGAGCTTTGCATCGGCAGAGAGAGAGGACAAGATTTGCTTCTCCCAGCAAATAA 1965 0.456 MQDIFGSVRRSLVFRASSENEDHSLGGTLVDKISYCIRNSRVFSKPSLSPPPLPPIPKEPTIRWRKGELIGCGAFGQVYVGMNLDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAALFHIGTTKSHPPIPDHLSSGAKDFLLKCLQKEPFLRPSASELLQHPFVTGEPMDSLPLSSAAMENFEPSSSSCAPNVEPHLRCSTVNPEDSGNEQFWGTSNDDDDMCMIDDKDDFLQSDVKYKPMMSENIESFNPMSDPSDDWGCKFDASPELDKGVSLGTNESYMSPGHSGANNSTGQKDFSFPCVPSLSEEDDELTESKIQAFLDEKALELKKLQTPLYEEFYNSLNTSCSPNVINCTSDERASRKYLKLPPKSRSPSRAPITPSKAVDSTGSPGSNGRSSSTVGNANDNGSQDIPSSPLKEWNGLTESQQEPSSPSLSFSERQRKWKEELDQELARKREMMRQAGVGGKTSSPKDRALHRQRERTRFASPSK* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0827 654 SUPERFAMILY Protein kinase-like (PK-like) 63 352 IPR011009 -
Aev06g0827 654 Pfam Protein kinase domain 65 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0827 654 Gene3D Transferase(Phosphotransferase) domain 1 63 357 - -
Aev06g0827 654 SMART serkin_6 64 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0827 654 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 611 - -
Aev06g0827 654 MobiDBLite consensus disorder prediction 635 654 - -
Aev06g0827 654 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Aev06g0827 654 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1 1 611 - -
Aev06g0827 654 Coils Coil 605 625 - -
Aev06g0827 654 CDD STKc_MAPKKK 63 327 - -
Aev06g0827 654 ProSiteProfiles Protein kinase domain profile. 64 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0827 654 Coils Coil 97 124 - -
Aev06g0827 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Aev06g0827 654 MobiDBLite consensus disorder prediction 540 602 - -
Aev06g0827 654 MobiDBLite consensus disorder prediction 603 625 - -
Aev06g0827 654 MobiDBLite consensus disorder prediction 527 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0827 Aev-Chr6 5644263 5648548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0827 1 654 MAP Kinase Kinase Kinase AT1G54960 57.759 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aev06g0827 Pkinase 2.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0827 K20606 - gmx:100807537 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0827 06 5644263 5648548 Aev06g0827 06 5644263 5648548 ECH