Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0821 ATGTTTGCACCAGTAGCTGAAAGAGGATATGAGGGTAGTGGAGTGTCAGGGCCCATTTTGATTCCAAAGCGCTTTGTCTGGCCTCATGGGGGAAGAAGAGTATTCCTAAGTGGTTCTTTCACAAGATGGTCAGAACATATACCCATGTCTCCAATGGAGGGATGCCCAGCAGTATTTCAAGTTATTTGCAGTTTAATGCCAGGATATCATCAGTATAAATTTAACGTGGATGGTGAGTGGCGGCATGATGAGCAGCAGCCATTTGTTAATGGGAACTATGGAGTAGTGAATACTATTTATTTAGGGCGAGAACCAGATATTTTACCCACCATATTGGGCGCTGAGACACCTGGTAGATCCCACATGGATGTTGATAATGTTGTCTTTGGGCATGTGGGAGCTAATCCAATTATGTCTGAGTCTGATCTGGAGGTCTCTCGCCACCGTATATCTGCATTCTTGTCTACGCATACTGCGTATGAGCTGCTTCCAGATTCAGGGAAGGTTATTGCCTTGGATATAAATTTGCCAGTTAAGCAGGCATTCCATGTACTTTATGAGCAGGGCGTATCTATGGCTCCTCTGTGGGACTTTTGTAGGAGCCAGTTTGTTGGAGTTCTTAGTGCAGTGGACTTCATTCTAATGCTGAAAGAGCTGGGAAATCATGGATCAAATTTGACTGAAGAGCAACTTGAGACTCATACTATAGCGGCCTGGAAAGAGGGGAAATTACAGCAACACAGGACACTTGATAGTAATGGGGGATCATATCCTTGGCGTTTTGTTCATGCTGGGCCTCATGATTGTCTGAAGGATGTGGCTTTGAAAATTTTGCAAAACAAGGTGTCAACAGTTCCTATCATCCATTCTTCTGTGGACGATGGTTCATTGCATCAGTTGCTACATCTTGCTTCTCTGTCAGGAATACTAAAATCCATATGCAGACAATTTAAGCATTCATCTAGCTCTTTGCCCATTCTTCAACTGCCAATTGGTTCAATACCTTTGGGTACATGGGTGCCTAAAGTTGGGGAACCAAATGGACAACCACTTGCAATGCTAAGGCCAAATGCTTCTCTTGGTGATGCTTTGTCCATGTTTGTTCAAGCTGAAGTTAGCTCAATACCAATTGTGGATGATAGTAATTCATTGCTTGATATATATTCAAGAAGTGATATTACTGCATTAGCTAAAGATAAGGCTTATGCTCAGATCTCTCTTGATGAGATCAGTATCCATCAGGCATTGCTTTTGAGACAAGATGCAAATTCTCCTTATGGGCTTTACAATGGCCAGAGATGTCACATGTGTTTGAGCTCTGACTCTCTGCAAAAAGTGATGGAGCGTTTGGCTAATCCTGGGGTAAGGAGGCTTGTGATTGTGGAGGCTGGAAGCAAGCGTGTGGAAGGGATTATTTCCTTAAGAGATGTGTTCAGATTCTTGTTAGGCTAA 1452 0.4304 MFAPVAERGYEGSGVSGPILIPKRFVWPHGGRRVFLSGSFTRWSEHIPMSPMEGCPAVFQVICSLMPGYHQYKFNVDGEWRHDEQQPFVNGNYGVVNTIYLGREPDILPTILGAETPGRSHMDVDNVVFGHVGANPIMSESDLEVSRHRISAFLSTHTAYELLPDSGKVIALDINLPVKQAFHVLYEQGVSMAPLWDFCRSQFVGVLSAVDFILMLKELGNHGSNLTEEQLETHTIAAWKEGKLQQHRTLDSNGGSYPWRFVHAGPHDCLKDVALKILQNKVSTVPIIHSSVDDGSLHQLLHLASLSGILKSICRQFKHSSSSLPILQLPIGSIPLGTWVPKVGEPNGQPLAMLRPNASLGDALSMFVQAEVSSIPIVDDSNSLLDIYSRSDITALAKDKAYAQISLDEISIHQALLLRQDANSPYGLYNGQRCHMCLSSDSLQKVMERLANPGVRRLVIVEAGSKRVEGIISLRDVFRFLLG* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0821 483 ProSiteProfiles CBS domain profile. 346 405 IPR000644 -
Aev06g0821 483 Pfam Glycogen recognition site of AMP-activated protein kinase 21 100 IPR032640 -
Aev06g0821 483 PANTHER BNAA08G26660D PROTEIN 10 483 - -
Aev06g0821 483 SUPERFAMILY CBS-domain pair 148 318 IPR046342 -
Aev06g0821 483 SUPERFAMILY CBS-domain pair 349 482 IPR046342 -
Aev06g0821 483 Gene3D - 139 323 IPR046342 -
Aev06g0821 483 Gene3D - 329 483 IPR046342 -
Aev06g0821 483 Gene3D Immunoglobulins 19 101 IPR013783 -
Aev06g0821 483 SUPERFAMILY E set domains 21 99 IPR014756 -
Aev06g0821 483 ProSiteProfiles CBS domain profile. 429 483 IPR000644 -
Aev06g0821 483 Pfam CBS domain 435 482 IPR000644 -
Aev06g0821 483 Pfam CBS domain 350 394 IPR000644 -
Aev06g0821 483 SMART cbs_1 168 217 IPR000644 -
Aev06g0821 483 SMART cbs_1 350 398 IPR000644 -
Aev06g0821 483 SMART cbs_1 433 482 IPR000644 -
Aev06g0821 483 CDD E_set_AMPKbeta_like_N 24 99 - -
Aev06g0821 483 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 10 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0821 Aev-Chr6 5582560 5587731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0821 25 111 Protein tyrosine phosphatase (PTP) family AT3G01510 35.556 3.60e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0821 - - gmx:100814655 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0821 06 5582560 5587731 Aev06g0821 06 5582560 5587731 ECH