Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0819 ATGTCAAATATCACAAGTTGTGACAGTGGGAGTTTCTCTACCGATAACACCACAGGAGCAGATCATCATGCACTAGTTAAACAGCAACAACAAGAGATAATACTAGGTGGTGGTGCCCAATTCCATAGCCCAAATTCTCATTCTTCATCTATACTAACAAATAATAGCAACGGTTCCAACACAAATTCACAACCACCACTACCTCCACCTCCTAAGAAGAAAAGAAATTTGCCAGGAAATCCAGATCCAAGTGCTGAAGTGATAGCTCTATCGCCAAACACACTAGTGACGACAAACAGGTTCATATGCGAAATATGCAACAAAGGGTTTCAAAGAGATCAGAACCTTCAATTGCATCGGAGAGGGCATAACTTGCCATGGAAGCTGAAACAGAGGGCGAGCGCAGAGGTTCGAAAGAGGGTGTACGTGTGCCCCGAGGCGTCGTGTGTGCACCATAACCCAGCTCGGGCACTGGGTGATCTAACCGGCATCAAGAAGCACTTCAGCAGGAAGCACGGGGAGAAGAAGTGGAAGTGTGAAAAGTGCTCTAAGAAATATGCAGTCCAATCTGACTGGAAAGCACATTCCAAAATCTGTGGTACCAAGGAATACAAATGTGACTGTGGCACCATCTTCTCCAGAAGGGATAGCTTCATTACCCACAGAGCTTTCTGTGACGCACTGAGTGAGGAGAATAACAAAGCGAATGAAGGACAGTTTTCAAAGATAGGTTCCAATTTATTGCAGGGTCAACCAAACCTACCAATAATCAATACTAACAACATTATTCGCCCACAACAACAGAGTATTATTGCCACGTCACCAGATCACAACAAGCATCACCCTGCAGCTTTATCATCATCATCATTCGGTTTGCTTCCAAAACTGATGATGAGTTCACCAAATTCTTCATCACTGAACATGTTCCAAGAGCCAAATGGGGGGTTCCATTTACCTCCCATGTCAGCCACCGCATTGCTGCAAAAAGCTGCACAAATGGGTGCAACTGCCACCCAACCATCACTACCATTCGGTTCTGTTATTCCCTCATCAAATAATCACAATAATAATAATAATGGGATCATCGTGGAACAGTATAATGCTGAACAGGGCGGTATTGATAATAATAATAATTTCAATAGCAACGATGGGATTGTAGGAATGATGAATGGGGTGGACATGTTCAATGCTATATTGGATCAAAGCAAGGCTCTGTCGAAGATCATAGAACAGAACAATAATAACATCAGTAGAAGCAGCAGCGGTGTTTTGCATGGTGGATGCACAATGAATGGGAGGTCCAGCGGTAAAGGAAGTGATGAGAATGTGATGACTTTAGACTTGTTGGGAATTGGTGGTGCTGCTGCTGGAGGAGGATACTTTGGTCCCTTGAATTATTAG 1401 0.4368 MSNITSCDSGSFSTDNTTGADHHALVKQQQQEIILGGGAQFHSPNSHSSSILTNNSNGSNTNSQPPLPPPPKKKRNLPGNPDPSAEVIALSPNTLVTTNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRASAEVRKRVYVCPEASCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKEYKCDCGTIFSRRDSFITHRAFCDALSEENNKANEGQFSKIGSNLLQGQPNLPIINTNNIIRPQQQSIIATSPDHNKHHPAALSSSSFGLLPKLMMSSPNSSSLNMFQEPNGGFHLPPMSATALLQKAAQMGATATQPSLPFGSVIPSSNNHNNNNNGIIVEQYNAEQGGIDNNNNFNSNDGIVGMMNGVDMFNAILDQSKALSKIIEQNNNNISRSSSGVLHGGCTMNGRSSGKGSDENVMTLDLLGIGGAAAGGGYFGPLNY* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0819 466 ProSitePatterns Zinc finger C2H2 type domain signature. 103 123 IPR013087 -
Aev06g0819 466 Pfam Zinc-finger double-stranded RNA-binding 101 123 IPR022755 -
Aev06g0819 466 ProSiteProfiles Zinc finger C2H2 type domain profile. 101 123 IPR013087 -
Aev06g0819 466 SUPERFAMILY beta-beta-alpha zinc fingers 100 197 IPR036236 -
Aev06g0819 466 Gene3D Classic Zinc Finger 155 236 - -
Aev06g0819 466 SMART c2h2final6 142 172 IPR013087 -
Aev06g0819 466 SMART c2h2final6 101 123 IPR013087 -
Aev06g0819 466 SMART c2h2final6 177 197 IPR013087 -
Aev06g0819 466 MobiDBLite consensus disorder prediction 63 77 - -
Aev06g0819 466 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 32 453 - -
Aev06g0819 466 MobiDBLite consensus disorder prediction 38 62 - -
Aev06g0819 466 Gene3D Classic Zinc Finger 80 150 - -
Aev06g0819 466 MobiDBLite consensus disorder prediction 38 84 - -
Aev06g0819 466 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 32 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0819 Aev-Chr6 5560819 5565049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0819 59 353 IDZ Gene Family AT3G50700 55.588 1.69e-116 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev06g0819 zf-C2H2_jaz 6.7e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0819 - - gmx:100813556 501.901