Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0793 ATGGCGGGGGAAGACGCGCAGAAGCACAAGAGGCTGATCATCATTGGTGTCTCTACCTTCCTACTGGTGGCGATGGTGGTGGCTGCGACGGTCACCATTTCGCTCAAGAACGGGAAAGAGATGGAGGCAAAGGAGGACGAGAGTGGGCACCTTTCAAGCTCGGTTAAGGCGGTGAAGACCCTGTGCGCACCAACACAATACACGAAGGAGTGCGAGGACACGCTGATAGCCGCCAACTCAGGCAACACAACGGACCCAAGAGAGCTCATCAAGATCGCCTTCCACGTGACCATGAACATGATCAAGGAGGGCGCCTCCAAGTCAGAGCTCCTCAACGACCTCGAGAAGGACCCCAGGGCCAAAGAGGCTCTCGACTCCTGCAAGCAGCTCATGGACCTGTCCATCGGCGAGTTCACGAGGTCCCTCGAGAAGATCGCCAAGTTCGACCTCAACAACATCGACAAAATCCTCACCAGCTTGAAGGTGTGGCTGAGCGGTGCCATCACCTACCAGGAGACATGCCTCGACTCCTTCGAGAACACCACCAGCAACGCCGGGCAGAAGATGAGGGACTACCTCCAGACGTCCATGCACATGAGCAGCAACGGCCTCGCCATCATCAACGAGCTCGCCAAGACCTTCGGCTCCATCAGCGTTCCCGTTGGTGCATCTGCAGGCAGCCGTCGCCTGTTTGAGGACGACGCCGACGATCAGGAGCTTCCTGAGTGGATCGAGGAGCGCATTGCCGTGCGTAAGCTCCTTGCCAAGGCGGGTAAGAGTAGCGGGAGGAGGATGATCAAGTCCAACGTGGTTGTTGCCAAGGATGGAAGTGGCGACTGCAGCAACATCAGTGATGCCTTGAAGAAGGTTCCCAGCAACAACCAGAAGCCATTCATCATCTACATCAAGGAGGGTAACTACAGCGAGTACGTTGAGGTTCCAAGGTCCATGACACACGTCGTCTTCGTGGGTGACGGTGCCACCAAGACCCGCATCACCGGCAACAGGAACTTCATCGACGGCGGGGCGGGGGGAGGACGTATAATTCCCCAATCAGTGGGTAATTTGGCAAACCCTCGCAATTTGGTGATGGCGGCCTCATCTTCCTCCCACTCCTCCTCCTCCTCTTCCTCCTCCGACGAAGATTCCTCTCATCGTCGCAGGCGCCACCACCGCTCTCGCCGCGACCGCGATAAGGATTCCCTCAAGGTCCGTAAGAAGACCAAGTCCCGCTCCAAACGACGCCGCACCAGGCACCGCCACTCTTCTTCCGATTCAGATTCCTACTCTTCCTATTCCCTCTCTGATTACGCCAGAAGTGAGAGTTCTTCTGATAGTGAGCATGAAACATCTCATCGTTCTAAGAGGCACAAAAAGAGCGACAAACCAAAAAAGAGTAAGGAAAAAGATCGAAGCAAAAGCCATCGCCATAAGCGGCAGAAGCATAAAGTAAAAGAGAAGCAGCATGATGAGAGGAGGAGCAGTCCTGTGCAGCTTTCCAAGTTTTTAGGACGTGATAAAGATGATGGTGTTCGTCGCAGTGCTGTATCTGGCAAGAAGATTCTTCTAAAACTTGATAAAACAAAGGAAGATAAGGAGGCTGAAAGCAGGAGAAGTGAACTGCTGAACTTCTTGAATGCTAGTTTTGATTAG 1653 0.5396 MAGEDAQKHKRLIIIGVSTFLLVAMVVAATVTISLKNGKEMEAKEDESGHLSSSVKAVKTLCAPTQYTKECEDTLIAANSGNTTDPRELIKIAFHVTMNMIKEGASKSELLNDLEKDPRAKEALDSCKQLMDLSIGEFTRSLEKIAKFDLNNIDKILTSLKVWLSGAITYQETCLDSFENTTSNAGQKMRDYLQTSMHMSSNGLAIINELAKTFGSISVPVGASAGSRRLFEDDADDQELPEWIEERIAVRKLLAKAGKSSGRRMIKSNVVVAKDGSGDCSNISDALKKVPSNNQKPFIIYIKEGNYSEYVEVPRSMTHVVFVGDGATKTRITGNRNFIDGGAGGGRIIPQSVGNLANPRNLVMAASSSSHSSSSSSSSDEDSSHRRRRHHRSRRDRDKDSLKVRKKTKSRSKRRRTRHRHSSSDSDSYSSYSLSDYARSESSSDSEHETSHRSKRHKKSDKPKKSKEKDRSKSHRHKRQKHKVKEKQHDERRSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKEAESRRSELLNFLNASFD* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0793 550 SMART PMEI_2 53 206 IPR006501 GO:0004857
Aev06g0793 550 Gene3D - 263 380 IPR012334 -
Aev06g0793 550 PANTHER PECTINESTERASE 12 341 - -
Aev06g0793 550 MobiDBLite consensus disorder prediction 364 514 - -
Aev06g0793 550 Pfam Plant invertase/pectin methylesterase inhibitor 57 206 IPR006501 GO:0004857
Aev06g0793 550 PANTHER PECTINESTERASE 12 341 - -
Aev06g0793 550 MobiDBLite consensus disorder prediction 487 514 - -
Aev06g0793 550 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 212 IPR035513 -
Aev06g0793 550 MobiDBLite consensus disorder prediction 406 420 - -
Aev06g0793 550 MobiDBLite consensus disorder prediction 364 379 - -
Aev06g0793 550 MobiDBLite consensus disorder prediction 426 440 - -
Aev06g0793 550 CDD PMEI-like_3 60 212 - -
Aev06g0793 550 Pfam Pectinesterase 269 341 IPR000070 GO:0030599|GO:0042545
Aev06g0793 550 SUPERFAMILY Pectin lyase-like 266 342 IPR011050 -
Aev06g0793 550 TIGRFAM PME_inhib: pectinesterase inhibitor domain 52 210 IPR006501 GO:0004857
Aev06g0793 550 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 210 IPR035513 -
Aev06g0793 550 MobiDBLite consensus disorder prediction 455 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0793 Aev-Chr6 5411178 5417271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0793 4 341 Carbohydrate Esterase AT3G05610 43.658 7.24e-91 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0793 K01051 - gmx:100801686 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0793 06 5411178 5417271 Aev06g0793 06 5411178 5417271 ECH