Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0791 ATGGCAATTTCCAAGGTTTCCCTAAGCTTACTAATATGCATGCTCTATCTAGTCAACATCTTATGCCACTTTCCCTCTCTTGCATTAGCCGCTACTAATTCCTCCACTGAAACAATCTGCAACCTCACACCTTACCCATCATTTTGTAAATCCCAGCCTCCTTCTAACAATGGTGACATTCATGACTATGCTCGTTTTTTCGCACAAAAATCACTGTCATCATCAAGGGACTTTCTCTCATTGCTCTCTAGTTACCTTTCCAAATCCGCTGAGTCAACGATGCTTATTAATGCCCTTCAAGATTGCCACCTCTTAGTTGACCTCAACACAGATTTCTGGACCAACACACTACAGAGCATCAATAACTCCAACAGCCTCAGAAGCTCCGAGGCTGAAAAATTGCTTACATTAATCACTGCTACATTAACAAACCTTGACACATGCTTAGATAGCCTCAAACAAGGCACTTCAAGCCCTGAAAATGACTTGTTAAGCTATATTTCAAATGGAACCATGCATTCTAGTATTTCTCTTGCACTCTTTAAACAGGGGTGGGGTGGTGGTATCATGATGAACACACAGAGAAAACTAGCACAGAGAAGAAGTGACTACATATGGGAACAGAGGCTTTATGAGGTTATGACAAGAAGGGGTAGGAAGTTGCTTCAATCGGCTCCTGATGGTGTTGTTGTGAGCCAAACGGTGGTGGTGAACCCTGATGGCTCAGGGAACTACACAACAATCACTGATGCTGTGAATGCAGCACCAAACAACACAGGTGGTGTGAATGGATTTTATCTGATTCATGTGGTGGCTGGAGTGTATGAAGAGTATGTTTCTATCCCAAAATACAAGCAGTATTTGATGATGATTGGTGATGGTATTAACCAGACCATAATCACGGGTAATCACAGCGCCGGTACTAACTACACTACCTTCAATTCCTTTTCATTTGCTGTGGTGGCACAAGGTTTCGTGGCAATGAACATAACATTTCGCAACACAGCTGGGCCAAGCAACTACCAAGCAGTGGCACTCAGAAGCGGCGCAGATCTCTCTGCATTCTACAATTGCAGCTTTGAAGGGTACCAAGACACGCTATACACACATTCGATGAGACAATTTTACAGAAACTGTGACATTTATGGTACCATAGACTTTATATTTGGCAACGCAGCAGTAGTTTTTCAAGATTGTAACATCTTCCCAAGACTCCCAATGCAAGGCCAGTTCAACACAATTACAGCACAGGGCAGAAGTGATATTAACCAAAATACAGGGACCTCCATACACAATTGTAGCATTTCTGCTGCAACTGATTTGGCTACTAGTAATGGTACCACAAAAACGTACCTAGGGAGGCCTTGGAAGCAGTACTCAAGAACGGTTTACATGCAATCTTTTATGGACAGTTTGATTGATCCAGCGGGTTGGGCAGAGTGGTCAGGGAATTTTGCATTGGACACACTTTACTATGCTGAATATGATAATCGGGGGCCAGGCTCTAACACTAGTCAGAGGGTTACTTGGCCAGGCTACCATGTGATCAATGCCACTGATGCTCAGAATTTCACCGTTTCTAATTTCATAGCTGGTGCTGCTTGGCTTCCTCCTACTGGGGTCCCATTCTTTCTTGATTTACTTTGA 1647 0.4329 MAISKVSLSLLICMLYLVNILCHFPSLALAATNSSTETICNLTPYPSFCKSQPPSNNGDIHDYARFFAQKSLSSSRDFLSLLSSYLSKSAESTMLINALQDCHLLVDLNTDFWTNTLQSINNSNSLRSSEAEKLLTLITATLTNLDTCLDSLKQGTSSPENDLLSYISNGTMHSSISLALFKQGWGGGIMMNTQRKLAQRRSDYIWEQRLYEVMTRRGRKLLQSAPDGVVVSQTVVVNPDGSGNYTTITDAVNAAPNNTGGVNGFYLIHVVAGVYEEYVSIPKYKQYLMMIGDGINQTIITGNHSAGTNYTTFNSFSFAVVAQGFVAMNITFRNTAGPSNYQAVALRSGADLSAFYNCSFEGYQDTLYTHSMRQFYRNCDIYGTIDFIFGNAAVVFQDCNIFPRLPMQGQFNTITAQGRSDINQNTGTSIHNCSISAATDLATSNGTTKTYLGRPWKQYSRTVYMQSFMDSLIDPAGWAEWSGNFALDTLYYAEYDNRGPGSNTSQRVTWPGYHVINATDAQNFTVSNFIAGAAWLPPTGVPFFLDLL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0791 548 SUPERFAMILY Pectin lyase-like 230 545 IPR011050 -
Aev06g0791 548 Gene3D - 228 547 IPR012334 -
Aev06g0791 548 ProSitePatterns Pectinesterase signature 2. 381 390 IPR033131 -
Aev06g0791 548 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 183 IPR006501 GO:0004857
Aev06g0791 548 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 183 IPR035513 -
Aev06g0791 548 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 183 IPR035513 -
Aev06g0791 548 CDD PMEI-like_3 38 186 - -
Aev06g0791 548 SMART PMEI_2 31 180 IPR006501 GO:0004857
Aev06g0791 548 Pfam Pectinesterase 235 532 IPR000070 GO:0030599|GO:0042545
Aev06g0791 548 Pfam Plant invertase/pectin methylesterase inhibitor 37 180 IPR006501 GO:0004857
Aev06g0791 548 PANTHER PECTINESTERASE 23 544 - -
Aev06g0791 548 PANTHER PECTINESTERASE 23 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0791 Aev-Chr6 5405997 5407867 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0791 6 548 Carbohydrate Esterase AT4G02330 50.690 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0791 K01051 - gmx:100801141 792.341