Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0790 ATGGCTTTACACTACTTTGCCACAACCCAAAAAATGGCATTGCTAAATTTCCTTTTCGTCCTCATGCTTTTACCCACACTTGATGCAACTCTCCCAGACGAAATGATCCCCACCACAGGAATCCAAACCCAAGACCTTAACGCCATGATTGCCCAAGCCTGCATGAACATAGAAAACCAGAACTCATGCCTCACCAACATCCAAAACGAGCTAGTCAAAATTGGGCCTCCAAGCCCAACTTCAGTGCTGAGCGCGGCGCTCGGCGCCACCATCAACGAAGCGAGAGGCGCAATCGACAAGATCAGCAAGTTCACAACATTATCTGTAAGCTACAGAGAGCAGCTAGCCATAGAAGATTGCAAGGAGCTTCTGGATTTCTCTGTTTCAGAGCTTGCATGGTCAATGGGTGAAATGAGAAGAATCCGAGCAGGGGATACGAGTGCTCAATACGAAGGTAACCTCGAAGCATGGCTAAGTGCAGCACTGAGCAACCAAGACACGTGCATTGAAGGGTTTGAAGGCACTGATCGGCGCCTCGAGAGCTACATCAGTGGAAGCTTGACACAAGTAACGCAGCTTATAAGCAATGTTCTGTCTCTGTACACACAACTCCACAGACTGCCCTTTAGTCCTCCGAGGAAGAGTAATTCGAGTGCTGAGTTTCCTGAATGGATGAGTGAGGGTGATCAAGAGCTGCTCAAGTCTGCGCCGCATGCTCGCGCTGATGCGGTTGTGGCTTTGGATGGGAGTGGCCACTACCGAAGCATCTCCGATGCTGTTAATGCTGCTCCCGCTCACAGTATCAGGAGGTATGTGATATACGTGAAGCAGGGGCTTTACAGGGAGAATGTGGATATGAAGAAGAAGATGACCAATATCATGCTCGTTGGCGATGGTATTGGCAAAACAATCATCACCAGCAACAGGAATTTCATGCAAGGTTGGACCACTTTCAGAACCGCCACACTTGCTGTGTCCGGGAAGGGATTCATTGCAAGGGACATGACGTTTCGGAACACAGCAGGACCAGTGAATCATCAAGCAGTGGCACTGCGAGTGGACTCAGACCAATCAGCGTTCTACAGGTGTAGCATAGAAGGCCACCAAGACACCCTTTACGCCCACTCGCTGCGCCAATTCTACCGTGAATGCGAGATCTACGGCACCATAGACTTCATCTTTGGCAACGGTGCAGCTGTGCTTCAGAACTGCAAGATCTACACACGTGTCCCTCTCCCGCTCCAGAAGGTTACCATCACGGCCCAAGGCAGAAAAAGCCCGCACCAGAGCACGGGCTTCATCATCCAAGATAGCTACGTCTTGGCAACCCAGCCCACGTATTTGGGCAGGCCTTGGAAGCAGTACTCCAGAGCCGTTTATATAAACACGTACATGAGTGCGCAGGTTCAGCCTCGAGGCTGGCTCGAGTGGTTCGGCAACTTTGCGTTGGACACCTTGTGGTACGGTGAGTACAGGAACTTTGGGCCTGGGTCGGGCCTCGCTGGACGGGTCAACTGGCCCGGTTTTCACGTTATTAAAGATGCTTCTGCTGCCAATTTCTTCACGGTTCAGCGGTTCATCAATGGGAACTCATGGTTGCCAGCAACAGGGGTCAAGTTCACGTCTGGCTTGACCAATTGA 1641 0.5107 MALHYFATTQKMALLNFLFVLMLLPTLDATLPDEMIPTTGIQTQDLNAMIAQACMNIENQNSCLTNIQNELVKIGPPSPTSVLSAALGATINEARGAIDKISKFTTLSVSYREQLAIEDCKELLDFSVSELAWSMGEMRRIRAGDTSAQYEGNLEAWLSAALSNQDTCIEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLHRLPFSPPRKSNSSAEFPEWMSEGDQELLKSAPHARADAVVALDGSGHYRSISDAVNAAPAHSIRRYVIYVKQGLYRENVDMKKKMTNIMLVGDGIGKTIITSNRNFMQGWTTFRTATLAVSGKGFIARDMTFRNTAGPVNHQAVALRVDSDQSAFYRCSIEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFIIQDSYVLATQPTYLGRPWKQYSRAVYINTYMSAQVQPRGWLEWFGNFALDTLWYGEYRNFGPGSGLAGRVNWPGFHVIKDASAANFFTVQRFINGNSWLPATGVKFTSGLTN* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0790 546 ProSitePatterns Pectinesterase signature 2. 386 395 IPR033131 -
Aev06g0790 546 PANTHER PECTINESTERASE 18 544 - -
Aev06g0790 546 Pfam Pectinesterase 242 530 IPR000070 GO:0030599|GO:0042545
Aev06g0790 546 TIGRFAM PME_inhib: pectinesterase inhibitor domain 18 205 IPR006501 GO:0004857
Aev06g0790 546 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 205 IPR035513 -
Aev06g0790 546 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED 18 544 - -
Aev06g0790 546 Gene3D - 237 544 IPR012334 -
Aev06g0790 546 Pfam Plant invertase/pectin methylesterase inhibitor 49 200 IPR006501 GO:0004857
Aev06g0790 546 SMART PMEI_2 45 200 IPR006501 GO:0004857
Aev06g0790 546 CDD PMEI-like_3 53 206 - -
Aev06g0790 546 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 205 IPR035513 -
Aev06g0790 546 SUPERFAMILY Pectin lyase-like 238 543 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0790 Aev-Chr6 5402500 5404245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0790 12 546 Carbohydrate Esterase AT3G05620 61.609 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0790 K01051 - gmx:100810565 932.939