Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0782 ATGGTTAGGGGAGGAAAGGTCCGTGGCAAATGCAATTTTAGGAAAAGGGTTAGGTCAAAGGAAGGCGGTTCTGATGAGTCAGATGAGGACTATGTGGTTTCAGATTTAGATACATATGTGTCTGATTATCTCGACGATTATAGCTCCTCTTTAGATGGATGTGCATCAGAGGGTAGTTTTGATGGTTTTATAGAAGAGGAGGAGGAAGAAAAGGAAATTCAACTAGGGAGAAAACTCTTTAGGTCAAGGGCCAAAAATGGTGTTTGCGGTCGGCAGAAAGATGCGAGTAAAACCTCACGAAAGAGGGGAAGGATTACATATGCAAAACAAGAAGAGCAAGAGCAAGAACAAGAGGCAAATGCTGATGGAGAGGGGGATGAGGACTTTGAGTATAATGATTATGACGATGATGAGGAATTTACACTAGATGAAGAAGATTGCTCGGATGAGGAATTAGAGATAGGGGTGAAAATAAAGAAAAATAATGGTGTGAAAATTAGAAAGAAGGTTTTAAAGAGAAGGGCTTCTGTAACTTCTACCAGACGTCGAAAGAGAAGGAGTTCTAGAGCTTCAAAGAAGCCCATGAGAAAGAAAAGAAGAAAGAATAGAGGGTTAAAAAGGAAAGTAAGATGTAATGATGTAGATGATTTTATAGATAATGATGATCTTGCCCCTACCATTAGGACAAAGAAGAGGAAAAAACACGATCGGGTAAAGAAAAGGTTTCTCATTGAAGACTCCATTTCTAACTGTGTTTCATCTAATTATGAGTTTACTATCTCTGAAGAAGAGAGAGAACAAGTGAGAGAAGCCAAGGAGTTGTGCCAAAGTTTGAGAAGGAACGTGAGAAGTTCTTCATTTCAAATGATACATGAAGATCTACATCAGCAACAAAAGCCACCAGTCCAAAAGGGTAAGGAAAAGATAAAAGAACCCCAAGGAAGAAAGGGGAAGGAAAAGGTAGATGATTTAAAAAGTGAGATGGTAAAGCAGAGATTCAAAACAATCAGCAAGCCTGCACGAACATCAGTAGGGATTGATTTGAGAGAAATAGTGGTTGAAGTGCCGGAGCGTGATCAGGTTTATCAGCCCTCTGAAGAAGAACTCAGAAGCTATATTGATCCATATGAGTATGTCATGTGTTCAGAGTGCCATCAAGGTGGAGATGATGCACTCATGTTACTGTGTGATATATGTGATTCTCCTGCACACACGTATTGCGTTGGTCTGGCCCGGGAAGTGCCCGAGGGTAATTGGTATTGTGATGGTTGTAGACCAGTTGCTTTAGCATCTTCAAGCACTCAAGTCCAAGACTCTGTGGATAATCTGAGGGTTACAACTCAAAGCTTGCCTGTTAGACCATCACATGTTCTCAATGTACCGGAAACTGTAGACCTCAACTTGTTTTCACCTCTTACATATCAAAGTCAAAGACTTGGGCATATTTCATCTTCTAGATTTTCTGGTAGAAATGTTGAAGCAGCTTCTCCGGTATCTGGAGGTGGGGCACCAACTTTATCAGAAAGACGCTGGATACACCGACAAATTCAGCAACTACGTTCAACAGATAGAATGACATATATCCCTGCCAGAACTAATGGTATTTCGGCTACTAGTTCAACAAGTAACTTATCTAGCTCGCAAATTGATCAAATTAGGGAAACAAATGCAACTCCACATACAAGGACACAGGAAATGGGAACATCATATCACCCATTCCTTGAGGAGAGATCGTGCAACAACAACTCTCCATCGATGCAGATCGGAGATCCATCCTCCATGAGAATAAGCAATGCAAGAAGACCAGTGGTTCATGATTCAATTATGGTTTCCAACAGTTCCATGAATAGGATGCTATGGCCTGGACTTGTGGGGACACCCTCCATATCAGATAATGGACCAGCCCATCAGTTCAGTAGCAGGTCGAACGTCGTAAATGATGTTAGCTTACCCACTGTTATCAGAGATCTTCAACAAAGTGACTTCCAAATTGTAAAGGAGCAGTTAATATCAATGGTTAAAAGTCACCTAAATAACTTGTCAAGAGAGATTGATATAGGGCGTAGTACTTTCAAAGAAATTGCAAAGAGTTCTACTCACACCCTACTAGCAGCATGTGGTCTTGAGCACAAGATGAGTGAGGTTTGCGCCATGCCGCCACCACCTGTGTGCCCCCACATTGAACTGATGGAGGGTGGACACACGAGTTTGATCAAAGGTTTCTGCTCAGATTGCTTTGATTCCCTTGTAAGAGATGTGGTGAATAGGATTGTCGACACTAAAATGTCGCCACAACAGTGGTTACGATTAGGACTTTAG 2319 0.4153 MVRGGKVRGKCNFRKRVRSKEGGSDESDEDYVVSDLDTYVSDYLDDYSSSLDGCASEGSFDGFIEEEEEEKEIQLGRKLFRSRAKNGVCGRQKDASKTSRKRGRITYAKQEEQEQEQEANADGEGDEDFEYNDYDDDEEFTLDEEDCSDEELEIGVKIKKNNGVKIRKKVLKRRASVTSTRRRKRRSSRASKKPMRKKRRKNRGLKRKVRCNDVDDFIDNDDLAPTIRTKKRKKHDRVKKRFLIEDSISNCVSSNYEFTISEEEREQVREAKELCQSLRRNVRSSSFQMIHEDLHQQQKPPVQKGKEKIKEPQGRKGKEKVDDLKSEMVKQRFKTISKPARTSVGIDLREIVVEVPERDQVYQPSEEELRSYIDPYEYVMCSECHQGGDDALMLLCDICDSPAHTYCVGLAREVPEGNWYCDGCRPVALASSSTQVQDSVDNLRVTTQSLPVRPSHVLNVPETVDLNLFSPLTYQSQRLGHISSSRFSGRNVEAASPVSGGGAPTLSERRWIHRQIQQLRSTDRMTYIPARTNGISATSSTSNLSSSQIDQIRETNATPHTRTQEMGTSYHPFLEERSCNNNSPSMQIGDPSSMRISNARRPVVHDSIMVSNSSMNRMLWPGLVGTPSISDNGPAHQFSSRSNVVNDVSLPTVIRDLQQSDFQIVKEQLISMVKSHLNNLSREIDIGRSTFKEIAKSSTHTLLAACGLEHKMSEVCAMPPPPVCPHIELMEGGHTSLIKGFCSDCFDSLVRDVVNRIVDTKMSPQQWLRLGL* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0782 772 MobiDBLite consensus disorder prediction 171 206 - -
Aev06g0782 772 PANTHER F18C1.6 PROTEIN 1 331 - -
Aev06g0782 772 PANTHER F18C1.6 PROTEIN 328 760 - -
Aev06g0782 772 SMART PHD_3 380 425 IPR001965 -
Aev06g0782 772 PANTHER F18C1.6 PROTEIN 1 331 - -
Aev06g0782 772 PANTHER F18C1.6 PROTEIN 328 760 - -
Aev06g0782 772 MobiDBLite consensus disorder prediction 297 322 - -
Aev06g0782 772 MobiDBLite consensus disorder prediction 294 322 - -
Aev06g0782 772 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 346 432 IPR013083 -
Aev06g0782 772 MobiDBLite consensus disorder prediction 87 116 - -
Aev06g0782 772 ProSiteProfiles Zinc finger PHD-type profile. 378 427 IPR019787 -
Aev06g0782 772 MobiDBLite consensus disorder prediction 85 133 - -
Aev06g0782 772 Coils Coil 261 281 - -
Aev06g0782 772 Pfam PHD-finger 380 426 IPR019787 -
Aev06g0782 772 SUPERFAMILY FYVE/PHD zinc finger 352 426 IPR011011 -
Aev06g0782 772 MobiDBLite consensus disorder prediction 117 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0782 Aev-Chr6 5319615 5322282 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0782 375 424 C2H2 Transcription Factor Family AT3G01460 46.154 2.09e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev06g0782 PHD 1.4e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0782 - - gmx:100791422 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0782 06 5319615 5322282 Aev06g0782 06 5319615 5322282 ECH