Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0780 ATGGTAAACATGGATATCAAGAAGGAATGGTCATCTGAGGATTTTAGTGAGATCAAGAAGTGTTGCACCGATTGCAAAACCACCAAGACTCCACTATGGAGAGGAGGACCAGCTGGACCCAAGACTCTGTGCAACGCTTGCGGAATAAGATACAGGAAGAGAAGGGCTTCTACGGTGGGGATGAACAAAGGACAAGAAAGGAAGAGAGAGAGAGCACAAAGTGGTTGCAGTAGCAGCTCTGGTGGTGATGATGATGATGTCTGTGGCAGCGATTTCAATGAGTCCTTGAAAGTGAATTTGATGGCATTGGGTGAGGAGTTTTGGTTGCAGCATTCATCCTCTGTTGTGAAGAAGAAGAAGAAGAAACAACAAAGGGGTAAGTTAGGGGAGGAGGAACAAGCAGCTTTCTGTTTGATGGCACTCTCCTGCGGCTATGTTTTCGCCTGA 447 0.4653 MVNMDIKKEWSSEDFSEIKKCCTDCKTTKTPLWRGGPAGPKTLCNACGIRYRKRRASTVGMNKGQERKRERAQSGCSSSSGGDDDDVCGSDFNESLKVNLMALGEEFWLQHSSSVVKKKKKKQQRGKLGEEEQAAFCLMALSCGYVFA* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0780 148 PANTHER OS01G0976800 PROTEIN 8 148 - -
Aev06g0780 148 SMART GATA_3 16 74 IPR000679 GO:0006355|GO:0043565
Aev06g0780 148 Gene3D - 17 79 IPR013088 GO:0006355|GO:0008270
Aev06g0780 148 ProSitePatterns GATA-type zinc finger domain. 22 47 IPR000679 GO:0006355|GO:0043565
Aev06g0780 148 MobiDBLite consensus disorder prediction 59 73 - -
Aev06g0780 148 CDD ZnF_GATA 22 55 IPR000679 GO:0006355|GO:0043565
Aev06g0780 148 ProSiteProfiles GATA-type zinc finger domain profile. 22 52 IPR000679 GO:0006355|GO:0043565
Aev06g0780 148 Pfam GATA zinc finger 22 55 IPR000679 GO:0006355|GO:0043565
Aev06g0780 148 PANTHER GATA TRANSCRIPTION FACTOR 16 8 148 - -
Aev06g0780 148 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 18 55 - -
Aev06g0780 148 MobiDBLite consensus disorder prediction 58 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0780 Aev-Chr6 5312594 5313668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0780 9 148 C2C2-Gata Transcription Factor Family AT5G49300 47.143 1.10e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev06g0780 GATA 3.8e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0780 - - lang:109330084 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2903 01 31102392 31103363 Aev06g0780 06 5312594 5313668 ECH
Aev06g0780 06 5312594 5313668 Aev06g0780 06 5312594 5313668 ECH