Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0779 ATGTCGTATCGTCCTTCTGGTAATTCCAGGACCGAGGTCCGTCGGAATCGGTACAAGGTGGCAGTGGACGCCGAAGAGGGTCGCCGTCGGCGAGAGGACACGATGGTGGAGATCCGCAAGAACCGTAGGGAAGAGAGCTTGCAGAAGAAGAGGCGCGAGGGCCTCCAAGCTCAGCAGATTCCTGCTTCAGTTCACTCCACTGTAGTAGAGAAGAAGTTGGAGCACTTGCCGTCCATGGTCACCGCTATTTGGTCTAATGATAATAACATGCAGTTTGAGGCAACAACTCAGTTTCGGAAGTTGCTTTCAATAGAACGTAGCCCTCCAATTGAGGAGGTAATACAAGCTGGTGTTGTTCCTCGCTTTGTTGAATTTTTGATGAGGGAAGATTTTCCACAGCTGCAGTTTGAGGCAGCTTGGGCTTTGACAAATATTGCTTCTGGAACATCTGAAAACACCAAGGTGGTAATTGATCATGGTGCTGTCCCGATTTTTGTTAAGCTTCTTGGTTCTCCAAGTGATGATGTCCGTGAACAGGCTGTATGGGCTTTAGGAAATGTTGCTGGAGATTCTCCCCGATGCCGTGATCTTGTTCTCAACAATGGAGCCTTACTTCCTTTGTTGTCACAATTGAATGAAAATGCCAAGCTCTCTATGCTCAGAAATGCTACCTGGACACTCTCAAACTTTTGCAGGGGAAAGCCACAGCCTCCTTTTGAGCAGGTTAAACCAGCACTTCCTGCTCTTGCCAGTCTTATCCATTCAAATGATGAAGAAGTCTTGACTGATGCCTGTTGGGCACTTTCATATCTTTCTGATGGCACAAATGACAAAATTCAAGGTGTAATTGAAGCTGGTGTTTGCAACAGACTTGTTGAGCTTCTAATGCACCCATCTCCTTCTGTGCTCATTCCTGCCCTTCGCACTGTTGGAAATATTGTCACTGGTGATGATGTGCAGACTCAGGTTATCATCAATCATCAGGCTCTTCCTTGTCTTCTGAATCTGTTGACTAATAATTATAAAAAAAGCATCAAGAAAGAAGCATGTTGGACCATATCAAACATCACAGCTGGGAATAAACAGCAGATTCAGGCTGTAATTGAGGCTAATCTAATTGGTCCTTTAGTCCACTTGCTTCAAAATGCGGAGTTTGATATTAAGAAAGAAGCTGCCTGGGCTCTCTCTAATGCTACATCTGGTGGATCTCATGATCAAATCAAGTACCTATTAAGTCAAGGGTGTATTAAGCCCTTGTGTGACCTTCTCATATGTCCTGATCCTAGGATTGTGACAGTTTGTCTGGAAGGGCTTGAAAATATCTTGAAAGTTGGAGAAGCTGATAAAAATGTTGGCAATACTGGTGATGTGAATCTATATGCCCAAATGATTGATGATGCTGAGGGGTTGGAGAAAATTGAGAACCTTCAGAGTCATGACAACACCGAGATTTATGAAAAGGCAGTGAAGATTCTAGAGACATACTGGTTGGAGGAAGATGATGAGACTATGCCTCCAGGGGAAGCTGCTCAATCAGGGTTCAACTTTGGTAGCACTGAAGTTCCTGCCGTGCCTTCGGGTGGATTCAACTTCAATTAG 1599 0.4472 MSYRPSGNSRTEVRRNRYKVAVDAEEGRRRREDTMVEIRKNRREESLQKKRREGLQAQQIPASVHSTVVEKKLEHLPSMVTAIWSNDNNMQFEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPRCRDLVLNNGALLPLLSQLNENAKLSMLRNATWTLSNFCRGKPQPPFEQVKPALPALASLIHSNDEEVLTDACWALSYLSDGTNDKIQGVIEAGVCNRLVELLMHPSPSVLIPALRTVGNIVTGDDVQTQVIINHQALPCLLNLLTNNYKKSIKKEACWTISNITAGNKQQIQAVIEANLIGPLVHLLQNAEFDIKKEAAWALSNATSGGSHDQIKYLLSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKNVGNTGDVNLYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEDDETMPPGEAAQSGFNFGSTEVPAVPSGGFNFN* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0779 532 PIRSF Importin_alpha 5 531 IPR024931 GO:0005737|GO:0006606|GO:0061608
Aev06g0779 532 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 117 160 IPR000225 GO:0005515
Aev06g0779 532 ProSiteProfiles IBB domain profile. 1 60 IPR002652 GO:0006606|GO:0061608
Aev06g0779 532 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 160 202 IPR000225 GO:0005515
Aev06g0779 532 PANTHER IMPORTIN SUBUNIT ALPHA 2 522 - -
Aev06g0779 532 SMART arm_5 360 400 IPR000225 GO:0005515
Aev06g0779 532 SMART arm_5 106 147 IPR000225 GO:0005515
Aev06g0779 532 SMART arm_5 403 443 IPR000225 GO:0005515
Aev06g0779 532 SMART arm_5 149 189 IPR000225 GO:0005515
Aev06g0779 532 SMART arm_5 317 358 IPR000225 GO:0005515
Aev06g0779 532 SMART arm_5 275 315 IPR000225 GO:0005515
Aev06g0779 532 SMART arm_5 234 273 IPR000225 GO:0005515
Aev06g0779 532 SMART arm_5 190 232 IPR000225 GO:0005515
Aev06g0779 532 Pfam Atypical Arm repeat 458 504 IPR032413 -
Aev06g0779 532 Gene3D - 12 52 IPR036975 GO:0006606
Aev06g0779 532 Gene3D - 74 497 IPR011989 -
Aev06g0779 532 Pfam Armadillo/beta-catenin-like repeat 107 147 IPR000225 GO:0005515
Aev06g0779 532 Pfam Armadillo/beta-catenin-like repeat 360 399 IPR000225 GO:0005515
Aev06g0779 532 Pfam Armadillo/beta-catenin-like repeat 404 441 IPR000225 GO:0005515
Aev06g0779 532 Pfam Armadillo/beta-catenin-like repeat 278 314 IPR000225 GO:0005515
Aev06g0779 532 Pfam Armadillo/beta-catenin-like repeat 245 272 IPR000225 GO:0005515
Aev06g0779 532 Pfam Armadillo/beta-catenin-like repeat 191 232 IPR000225 GO:0005515
Aev06g0779 532 Pfam Armadillo/beta-catenin-like repeat 317 358 IPR000225 GO:0005515
Aev06g0779 532 Pfam Armadillo/beta-catenin-like repeat 149 188 IPR000225 GO:0005515
Aev06g0779 532 Pfam Importin beta binding domain 14 96 IPR002652 GO:0006606|GO:0061608
Aev06g0779 532 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 244 286 IPR000225 GO:0005515
Aev06g0779 532 PANTHER IMPORTIN ALPHA 2 522 - -
Aev06g0779 532 SUPERFAMILY ARM repeat 14 501 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0779 Aev-Chr6 5305697 5309293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0779 132 395 U-box Gene Family AT3G46510 24.535 4.90e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0779 K15042 - gmx:100789135 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0779 06 5305697 5309293 Aev09g1095 09 12874200 12879171 PCT