Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0731 ATGAAGAAGGTAAAACTGAAGTACATATCCAATGATTCTGTAAGGAAAGCAACATTCAAGAAAAGGAAGAGGGGCCTCATGAAGAAGGTGAATGAATTAGCCATTCTCTGTGGGATTCAGACATGTGCCATTATTTTCAGCCCCTTTGAGTCTGGGCCTGAGGTTTGGCCCAGCCCACAGGGGGCCCAAGAAGTGATTGAGAGGTATCAGAATGCCAAAGTGGCTGATGACATTATTTGCAGGAGTGTGAACCAACAGAGTTTTATGATGCAGAGGATTGCCAGAGCCAAGCAACAACTGCAAAAGCTGCGAAAGGAAAATCATGACAAGAACATGAACCTAGCTGTGCTCCAAGCTATGGAAGATAAAAGCCTGCTAGAAAACCTGACAATTGTCGATCTCAATGAGATCAAATCTATGATCCAGTTCAATATCGTGGAAATTGAAAGGAAGATTAATGCGATTCACTAG 471 0.4289 MKKVKLKYISNDSVRKATFKKRKRGLMKKVNELAILCGIQTCAIIFSPFESGPEVWPSPQGAQEVIERYQNAKVADDIICRSVNQQSFMMQRIARAKQQLQKLRKENHDKNMNLAVLQAMEDKSLLENLTIVDLNEIKSMIQFNIVEIERKINAIH* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0731 156 ProSiteProfiles MADS-box domain profile. 1 47 IPR002100 GO:0003677|GO:0046983
Aev06g0731 156 PANTHER SERUM RESPONSE FACTOR HOMOLOG 2 156 - -
Aev06g0731 156 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 2 156 - -
Aev06g0731 156 SMART madsneu2 1 58 IPR002100 GO:0003677|GO:0046983
Aev06g0731 156 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 8 48 IPR002100 GO:0003677|GO:0046983
Aev06g0731 156 PRINTS MADS domain signature 21 36 IPR002100 GO:0003677|GO:0046983
Aev06g0731 156 PRINTS MADS domain signature 36 57 IPR002100 GO:0003677|GO:0046983
Aev06g0731 156 PRINTS MADS domain signature 1 21 IPR002100 GO:0003677|GO:0046983
Aev06g0731 156 CDD MADS_SRF_like 2 69 IPR033897 GO:0000981|GO:0000987|GO:0045944
Aev06g0731 156 Gene3D - 11 92 IPR036879 GO:0003677|GO:0046983
Aev06g0731 156 Coils Coil 86 120 - -
Aev06g0731 156 SUPERFAMILY SRF-like 2 75 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0731 Aev-Chr6 5033895 5034365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0731 2 152 Type I MADS-box Gene Family AT1G65300 39.073 4.38e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Aev06g0731 SRF-TF 9.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0731 - - palz:118035009 161.77