Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0728 ATGCCTCTGCATGAGTTGTACCGCATGGCCAAAGGGAAGCTTGATTCTAGAGAGATGATCAACACCTCATGTGCTCCTGATCAATCAACCGTACCAGAGAATGATTTCTTAGAGCTTGTTTGGGAAAATGGGCAGATTTCAGTGCAGGGTCAGTCAAGTAGAGGTAGAAAGAGCCCAACAACTTGTAAGAGTCTGCCATCTCATTGCTTACCATCTCACTGTACCAATAATTATAATAGTAACAATAATGATATGATGATGAGGATGGGGAAGTTTGGGGATTTAGATAGTGGATTCAATGAACTTAGAATGCCGGTCCCATCAGGTGAAGATGTGGGTCTAACTCAAGATGAAGATGTGATGATGCCTTGGTTGAATTATGCAATGGATGAGCCTTTGCAACATGAATACAGTTCTGGTTTCTTGCATGAACTATCAGGGGTCACCATGAATGACCTCCCCGCATCAAATAATTTCTCTTTACTTGACAAAAGAAGTAATTGTAATCAGGTGTTTAGGGATTCTCACAGAAACTATGCACTTTCCAAGGGCCCTTCAGCTGCAGCTAGGGAAGTTGAGAACCCTGCTCCTAAAGCTGGCACAAGTCAGTTTTACCATCCATCATCACATCAATATCAAGCTTCATTTGCATCTGTTAGATCCAGGGTGTCTGATGTAACTGAGAATAATGCTAGTAATGCTACTCATCATGCACCTAATTGTGGGGATATCACTCAGATTTTCCCATCTGCCTCAAGTGGTTTTTCTAGCTTGAAGGTGATGGATAAGCAAGATCCAATTATGTCAAGCAGTAGTTCAATGACCACCATAATGAATTTCTCCCATTTTGCAAGACCTGCTGCTATTGTGAAAGCTAATCTTCAGAACATTGGCTTGTCTTCATCAAGATCAGAAAATATTGGAAATAAGAATAAAGCTGCTGCTGCAGCAACTGCAAGTAATCCTCCTGAGTCAACAAAAGTTTGTTTAAGTGGAGATTGTCCTAAGGAATCACCAACCTTGCAGAAGAAACAGGCTGTGGAGGCATCTAAGGCTGATTTGAAGCAATTGGAGACAAAGTCTCTTGAAGGGATTGCTGCTCTTTCTAAGCAGTCTGACCCTGCTCGCAATGAAGATGTGTCTAAGACTGATCAAAATTCCAATCTACTTCATTGTGAAAGTAGCAATAAAGGACAGGAACCTGTTGAGAAAAATGTGGAGCCAGCAGTAGCCTCTTCATCTGTCTGCTCTGGCAATGGTGCAGAGAGAGGTTCAGGGGACCTAAATCAAAATTTAAGGCGAAAAAGGCGAGACCATGAGGACTCTGAGTGCCACAGTGAAGATGTTGAGGAAGTATCAGCGGGTGTTAAAAGGGCGGCTCCGGCACGAGGAGGCACGGGCTTCAAGAGAAGCCGTTCAGCTGAAGTGCACAATCTGTCTGAAAGGAGGCGAAGAGACAGGATCAATGAGAAGATGCGTGCATTGCAAGAACTTATACCAAATTGCAATAAGGTGGACAAAGCTTCAATGCTGGACGAGGCAATTGAGTATCTTAAAACACTTCAACTTCAAGTTCAAATTATGTCAATGGGAGCTGGTTATTATATGCCACCAATGATGTTACCTGCGGGAATGCAGCACATGCATCCACCACACATGGCTTCTTTTACACCCATGGGTGTTGGCATGCAGATGGGGTTGGGAATGGGTTACGGAATGGGTATGCACGACATTAATGGTGGATCTTCTAGATTCCCAATGATGCCGGTGCCCCACATGCAAGGACCTCATCTTCCAGTTACATCGATGTCCGGACCTTCTGCTTTTAATGGGATGGGAAGATCAAATCCTCAAGTGTTTGGCGTTCCTGGTCAGAGACTAACAACACCAATGCAACGGGCTCCAATATTTTCTCTTCCAGGAGAGCCTGTCTTGAACTCACCAGCAGTCGGACTAAATGCTAGTGGAACAGCAGGAGTTATGGAAAATGCGATTTCAGCTTCAGCCTCTGGCTTGAAGGATCAAACGCTAAATACAAACTCACAAGCTATGCAGAAAACCAATGGCTGTAACTCAACAAATCAGATGACTACACAGTGTGAAGTAACAGCTGGTGGATTTGAACACTCTGCTGCGCCTGAGGCTAACGACGGCGACGCTGTTAATGCCGTCAAAGAAGATAACAAATAA 2190 0.4397 MPLHELYRMAKGKLDSREMINTSCAPDQSTVPENDFLELVWENGQISVQGQSSRGRKSPTTCKSLPSHCLPSHCTNNYNSNNNDMMMRMGKFGDLDSGFNELRMPVPSGEDVGLTQDEDVMMPWLNYAMDEPLQHEYSSGFLHELSGVTMNDLPASNNFSLLDKRSNCNQVFRDSHRNYALSKGPSAAAREVENPAPKAGTSQFYHPSSHQYQASFASVRSRVSDVTENNASNATHHAPNCGDITQIFPSASSGFSSLKVMDKQDPIMSSSSSMTTIMNFSHFARPAAIVKANLQNIGLSSSRSENIGNKNKAAAAATASNPPESTKVCLSGDCPKESPTLQKKQAVEASKADLKQLETKSLEGIAALSKQSDPARNEDVSKTDQNSNLLHCESSNKGQEPVEKNVEPAVASSSVCSGNGAERGSGDLNQNLRRKRRDHEDSECHSEDVEEVSAGVKRAAPARGGTGFKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGYYMPPMMLPAGMQHMHPPHMASFTPMGVGMQMGLGMGYGMGMHDINGGSSRFPMMPVPHMQGPHLPVTSMSGPSAFNGMGRSNPQVFGVPGQRLTTPMQRAPIFSLPGEPVLNSPAVGLNASGTAGVMENAISASASGLKDQTLNTNSQAMQKTNGCNSTNQMTTQCEVTAGGFEHSAAPEANDGDAVNAVKEDNK* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0728 729 PANTHER TRANSCRIPTION FACTOR PIF3 1 697 IPR044273 GO:0003700|GO:0006355
Aev06g0728 729 MobiDBLite consensus disorder prediction 410 426 - -
Aev06g0728 729 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 472 521 IPR011598 GO:0046983
Aev06g0728 729 MobiDBLite consensus disorder prediction 183 205 - -
Aev06g0728 729 Pfam Helix-loop-helix DNA-binding domain 476 522 IPR011598 GO:0046983
Aev06g0728 729 MobiDBLite consensus disorder prediction 381 401 - -
Aev06g0728 729 MobiDBLite consensus disorder prediction 368 482 - -
Aev06g0728 729 PANTHER TRANSCRIPTION FACTOR PIF3 1 697 - -
Aev06g0728 729 MobiDBLite consensus disorder prediction 428 454 - -
Aev06g0728 729 Gene3D - 468 530 IPR036638 GO:0046983
Aev06g0728 729 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 475 546 IPR036638 GO:0046983
Aev06g0728 729 MobiDBLite consensus disorder prediction 313 327 - -
Aev06g0728 729 MobiDBLite consensus disorder prediction 313 332 - -
Aev06g0728 729 SMART finulus 478 527 IPR011598 GO:0046983
Aev06g0728 729 CDD bHLH_AtPIF_like 472 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0728 Aev-Chr6 5015035 5018618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0728 1 603 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 36.007 1.87e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g0728 HLH 6.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0728 K12126 - gmx:100794974 787.334