Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0726 ATGGGAAGACACTCTTGCTGCTACAAGCAGAAGCTTCGTAAAGGGCTGTGGTCTCCAGAGGAAGACGAGAAGCTTCTGAATTACATCACCAAGCATGGGCATGGATGTTGGAGTTCGGTTCCCAAACTAGCTGGTCTGCAGAGGTGTGGGAAGAGCTGCAGATTGAGGTGGATAAATTACCTGAGGCCTGATTTGAAGAGAGGCGCATTCTCTCTGCAGGAAGAGAATTTGATTATTGAGCTCCATGCTGTTCTTGGCAACAGGTGGTCTCAAATTGCAGCTCAGTTACCAGGAAGAACAGACAATGAGATTAAAAATCTATGGAACTCATGCCTGAAGAAGAAGCTGAGACAAAGAGGGATTGATCCAAACACCCACCAACCACTCTCTGAGGTTGAGAATGACAAGCCACCCACAGCCGACAATAAAACCAACAACAATCAAAAGGCCTCTGTTGGATCCAATGATGTAAGCCTAGCCACAATTCATGAGCAGCCAGCAGCAGCAAAGGCAGTAATCCCCTGCAGCATGGGGGAGCGCTTCCCTCTTGAGGTTTCTTCCTCCAAAATCAACACACCGCCACCAACCCAGGAACTGTTCCTAGATAGGTTCGTCACTGGTTGCAGACCTTCTGATATTGTTATGATGACTACTACTCCTACCTATCTCTCTTTCACTAACCATCTCAACAACTATGGCTTCAACCCAACAACAAACAATAACACCTCTTTTTGCTTCACGCCAAATTCCACTTGTTCTTCTTCTTCTCCCCAAATCATGTCAGATCAGCTCAACACCTCTGCCTTAACCATGCTCCAATCTGTGTCAAACTCTTCAGTAGTTTTCCCACCAACGCATGTAGTGAAGCCTACCATTAGCCTCCAGTCAAATAACAACAACAACACTGCAAGTTCAGTATCAAATGGTACTGACATTGATGGGAGCGGCACAAACTTCATCGATAGCAGCACCACTACTCTGAGTTGGGGGCTGGCAGAGCAGTCTGCAAAAGCAGCTGATCATGCTCATAAAGAGTCTCATCATGATGATGTGGTCCATGTAGTAGCATTGCAGGAAGCAGAGCAAGAAGAGATAAAATGGTGTGAATATCTCAACAGTAGCACCCCCTTCTATCTGGGAAGCAGCAACAGCAACACACACAGCTCAATCTACAGTAGTACTGCGAGTGATGAGGTGAAAGCAGAAACAGGGTTCATGACAGAGGAAAACAGTGGCACATGGCATCACCATAGCCACCACAACGCAGCAGCATCATCAGCTTTTCAGGCCACAGATATATACACCAAAGATCTGCAGAGATTTTCAGTGGCTTTTGGACAGACGCTGTAG 1350 0.4652 MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSLQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHQPLSEVENDKPPTADNKTNNNQKASVGSNDVSLATIHEQPAAAKAVIPCSMGERFPLEVSSSKINTPPPTQELFLDRFVTGCRPSDIVMMTTTPTYLSFTNHLNNYGFNPTTNNNTSFCFTPNSTCSSSSPQIMSDQLNTSALTMLQSVSNSSVVFPPTHVVKPTISLQSNNNNNTASSVSNGTDIDGSGTNFIDSSTTTLSWGLAEQSAKAADHAHKESHHDDVVHVVALQEAEQEEIKWCEYLNSSTPFYLGSSNSNTHSSIYSSTASDEVKAETGFMTEENSGTWHHHSHHNAAASSAFQATDIYTKDLQRFSVAFGQTL* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0726 449 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Aev06g0726 449 CDD SANT 17 61 IPR001005 -
Aev06g0726 449 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Aev06g0726 449 SMART sant 66 114 IPR001005 -
Aev06g0726 449 SMART sant 13 63 IPR001005 -
Aev06g0726 449 MobiDBLite consensus disorder prediction 139 153 - -
Aev06g0726 449 MobiDBLite consensus disorder prediction 119 153 - -
Aev06g0726 449 PANTHER HOMEODOMAIN-RELATED 1 442 - -
Aev06g0726 449 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev06g0726 449 CDD SANT 69 109 IPR001005 -
Aev06g0726 449 Gene3D - 11 67 - -
Aev06g0726 449 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aev06g0726 449 PANTHER MYB DOMAIN PROTEIN 55 1 442 - -
Aev06g0726 449 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev06g0726 449 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev06g0726 449 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Aev06g0726 449 Gene3D - 68 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0726 Aev-Chr6 4993940 4995531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0726 1 449 MYB Transcription Factor Family AT1G09540 43.991 2.45e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev06g0726 Myb_DNA-binding 3.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0726 K09422 - gmx:100788976 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0726 06 4993940 4995531 Aev06g0707 06 4851785 4853323 ECH
Aev06g0726 06 4993940 4995531 Aev06g0726 06 4993940 4995531 ECH