Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0719 ATGGCCTCCTCTATGATAGGTATTTCCTCCATTTGTCAAACTCCTTCTCTCTCTCACGAACCGTTCAAGAGGCCACCACCTTCTACTTCTTCTTCTTCTTCTTCCCTTTCGTTGCAATGTCTGGACAGCAAGTCCCACTTCAACAACGTTCTCAGAGCTCACCTTTGTAGCAACAACAGCAACAACAAGGCTGGGTTTAAGCCTACTGTTAGTTTTGTTACTTCCGCCATTGCCACTCCGAATTCTGCTTCTCTTCTCAGCGAAGAAGCTTTCAAGGGAATAGGTCGTGGTGACTTCCCTGAAAACGACGACGACGACTTCATCGGCGGCTATGAAGACTCTGAGACAGAAGATGGGTCTCCTGCTAGCACTGATGAACTTGACGTTTCCAAGCTGGGCCTTCCTTCGCGCCTCGTTGATTCGCTACAAAAGCGTGGAATTACCCAGCTTTTCCCCATTCAGAGAGCGGTGTTAGTACCTGCACTAGAAGGTAGAGATATCATTGCTCGAGCAAAGACTGGGACTGGCAAGACTTTAGCATTTGGGATTCCAATTATTAAAGGCCTCACCGAAGGTGAACTTTCAGTTCCTCAAAGGCGGTCTGGTCGTCTTCCTAGAGTGTTGGTCCTTGCGCCTACCAGGGAGCTAGCAAAGCAAGTAGAGAAAGAGATAAAGGAGTCTGCACCTTATCTTAGCACAGTTTGTGTTTATGGTGGTGTTTCTTATGTCACCCAGCAAAGTGCACTTTCTCGTGGTGTTGATGTGGTTGTTGGAACACCTGGTAGAATAATTGACCTTATCAATGGGAACAGCCTTAAACTGGGTGAAGTTCAGTATCTTGTCCTTGATGAAGCTGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTTGAAGTAATTTTGGAAAAGCTCCCATCGCAGAGGCAGAGCATGCTTTTTTCTGCAACCATGCCGGGCTGGGTGAAGAAATTGGCGAGGAAGTATTTGGACAATCCGTTGACAATTGATTTGGTTGGTGAAGAAGAAGAAAAGCTTGCAGAAGGGATAAAACTGTATGCTATATCAGCCACTGCCACTTCTAAGCGGACAATGCTTTCTGATCTTATAACTGTTTATGCTAAGGGTGGGAAGACTATAGTTTTTACACAGACTAAAAGAGATGCCGATGAAGTATCATTGGCATTAACAAGTAGTATCGCTTCTGAAGCGCTGCATGGTGATATATCTCAGCATCAGAGAGAGAGAACATTAAATGGTTTTCGGCAAGGAAAATTCACGGTGCTTGTTGCCACTGATGTTGCAGCTCGTGGGCTTGATATTCCCAATGTTGATTTGATTATCCATTATGAGCTTCCCAATGATCCTGAGACTTTTGTACATCGATCTGGTCGTACTGGGCGTGCAGGAAAAGAAGGTACTGCCATTCTTATGTATACCAGTAGCCAGAGGAGAACAGTTAGATCCCTGGAGCGTGATGTAGGCTGCAAATTTGAATTCATTAGTCCTCCATCAATAGAAGAGATTTTGGATTCATCTGCTGCACAAGTTGTTGCCACACTCAATGGAGTTCATCCTGAGTCTGTTGCATTTTTCACACCAACTGCACAAAAACTGATTGAAGAACAGGGAACAAGTGCCCTTGCAGCTGCACTAGCACAGATGAGTGGATTCTCTCGGCCTCCATCATCCCGGTCTTTAATCACCCATGAACAGGGATGGGTTACATTGCAGCTGATTCGAGAGTCAAATAATAGTAGATATTTTTCTGCAAGATCAGTCACTGGGTTTCTTTCTGATGTTTATTCTCCAGCTGCTGATGAAGTTGGAAAAATACATATAATTGCAGATGAAAGGGTTCAAGGAGCTGTTTTTGATCTCCCAGAGGACATTGCTAAAGATTTACTTAGCAAGGAAATACCGTCTGGAAATACTATTTCCAAGATTACCAAGTTACCTCTTTTGCAAGATGATGGGCCAGCAAGTGATTTCTATGGCAAGTTTTCTGACAGGGATAGAAGTAGCCGACGGGGAGGTTCTAGTCGGAGAGGTGGTTTTAAAACTTCACGGGGACGGGATGGGGGCCGAGACCGAGACTTTGATGATGACTTCGGTGATTCATTCAGGAGAGGTGGTAGAAGTAATAGAACTAGCGGCAGCAGCTGGTCTAGAGCAGGAAAATCCAGCGGGGATGATTGGTTAATTGGAGGTAGACGATCAAGCAGGCCTTCATCAGACAGGTTCTCATCACCAGGCAGGTCTTCATCATCGGGCAGGTTCTCATCATCAGACAGAGGCGGCTTTGGAGGGTCATGTTTTATTTGTGGTGAATCTGGGCATAGAGCATCAGATTGTCCAAGCAAGTTTTAA 2367 0.4525 MASSMIGISSICQTPSLSHEPFKRPPPSTSSSSSSLSLQCLDSKSHFNNVLRAHLCSNNSNNKAGFKPTVSFVTSAIATPNSASLLSEEAFKGIGRGDFPENDDDDFIGGYEDSETEDGSPASTDELDVSKLGLPSRLVDSLQKRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIIKGLTEGELSVPQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYVTQQSALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPSQRQSMLFSATMPGWVKKLARKYLDNPLTIDLVGEEEEKLAEGIKLYAISATATSKRTMLSDLITVYAKGGKTIVFTQTKRDADEVSLALTSSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSSQRRTVRSLERDVGCKFEFISPPSIEEILDSSAAQVVATLNGVHPESVAFFTPTAQKLIEEQGTSALAAALAQMSGFSRPPSSRSLITHEQGWVTLQLIRESNNSRYFSARSVTGFLSDVYSPAADEVGKIHIIADERVQGAVFDLPEDIAKDLLSKEIPSGNTISKITKLPLLQDDGPASDFYGKFSDRDRSSRRGGSSRRGGFKTSRGRDGGRDRDFDDDFGDSFRRGGRSNRTSGSSWSRAGKSSGDDWLIGGRRSSRPSSDRFSSPGRSSSSGRFSSSDRGGFGGSCFICGESGHRASDCPSKF* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0719 788 Pfam Helicase conserved C-terminal domain 362 469 IPR001650 -
Aev06g0719 788 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 158 335 IPR014001 -
Aev06g0719 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 490 IPR027417 -
Aev06g0719 788 MobiDBLite consensus disorder prediction 15 36 - -
Aev06g0719 788 SUPERFAMILY Retrovirus zinc finger-like domains 756 787 IPR036875 GO:0003676|GO:0008270
Aev06g0719 788 MobiDBLite consensus disorder prediction 741 763 - -
Aev06g0719 788 Pfam Zinc knuckle 770 786 IPR001878 GO:0003676|GO:0008270
Aev06g0719 788 SMART helicmild6 389 469 IPR001650 -
Aev06g0719 788 Pfam DEAD/DEAH box helicase 151 324 IPR011545 GO:0003676|GO:0005524
Aev06g0719 788 CDD DEADc 138 336 - -
Aev06g0719 788 ProSiteProfiles Zinc finger CCHC-type profile. 771 786 IPR001878 GO:0003676|GO:0008270
Aev06g0719 788 SMART ultradead3 146 352 IPR014001 -
Aev06g0719 788 MobiDBLite consensus disorder prediction 104 122 - -
Aev06g0719 788 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 364 509 IPR001650 -
Aev06g0719 788 Gene3D - 351 548 IPR027417 -
Aev06g0719 788 Gene3D - 128 339 IPR027417 -
Aev06g0719 788 CDD SF2_C_DEAD 349 478 - -
Aev06g0719 788 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 71 782 - -
Aev06g0719 788 MobiDBLite consensus disorder prediction 95 128 - -
Aev06g0719 788 Gene3D - 766 787 - -
Aev06g0719 788 MobiDBLite consensus disorder prediction 685 709 - -
Aev06g0719 788 Pfam GUCT (NUC152) domain 556 655 IPR012562 GO:0003723|GO:0004386|GO:0005524
Aev06g0719 788 PANTHER - 71 782 - -
Aev06g0719 788 MobiDBLite consensus disorder prediction 662 767 - -
Aev06g0719 788 MobiDBLite consensus disorder prediction 663 678 - -
Aev06g0719 788 CDD GUCT_Hera 563 642 - -
Aev06g0719 788 MobiDBLite consensus disorder prediction 710 726 - -
Aev06g0719 788 SMART c2hcfinal6 770 786 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0719 Aev-Chr6 4935804 4940025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0719 153 509 Eukaryotic Initiation Factors Gene Family AT1G72730 37.569 1.04e-64 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0719 - - vra:106757668 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0719 06 4935804 4940025 Aev06g0719 06 4935804 4940025 ECH