Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0705 ATGATTGGGATGACAAGAAGCTCCTCCCTACCCTCCCTGTGTGAGAAGGATTTCCTTGAGCTAGTATGGGAAAATGGTCAAATTCTTGAGAGAGGAGGAGGTTCTTCATCAAATACACATCATGAAGGAAGAAGAACAAGGCTGAGCAGAGTATACTCAGTTTTGGATGATGAGTTCCCACCTCATCACAGAGACTCTGATCTCATGATGATGAGCTCTTCACATCAAAGCAGCGACCAACATTCCTGCCAGATTGATGATCTGCACTTTCCTCCAATTGGCAAGAACTCATTAAGCATGCTTCATCAAGAACACTTTGCAAACTCCTCAAGATCACCATCATCATCATCAGCAAAAGAATCTAAGATCAATAATAATAATAACCTGTTATGCACATATTCAACACCCTCACAACAGTGCTTACCTACTTTTTCATCTCCTCCCAAGAAACCAAGAGTGGATCATTGTTCAACCCAAGCAGCAAAAAAACCAAACACACAGAACTTGGGGTGTGATATTAATCAGAGAACAACAAGAAAGGTGAACTTCTCAAACTTCTTGATACCTGCACTCTGTCTCAAATCTTCTCATCTTCAGGGCAACATTGCAAACCAGCAAACAAGAAACAACAATAATGCATCATCATCATGTTCTGCAAGAGTGGAAGAGATTAATGAAGCTGGAAAGGTAGACAAAACACCACCTGCTGCTACTAATCATAATAATAACAGTGCCCTTAGAATTCAAGTTCAAGGATCTCATCCTGTTCCATATTACAACAAAACCTCAAGCTCAGCAGCATCTAAAGCAAAGGGAATAGCTAATAATAATAATAATGATGATGAGTTCTGTAATGATCCTTTGCTAGCATCTTCTTCTGTGTGCTCTCTTGAAGCCTCAAATGATCCAAAAATTAGTGTCACGAAACATGTACATGAGTACACCACAGATGACTCAACATATTTCAGTGATAATGATGAAGAAACAGAAGATGTGGTAAAGGAAACACCACCTCGGGATCTTACTAGAGTCAAGAGATGCAGGAATCCTGAGATTCACAATTTATCTGAAAGGAAAAGAAGAGATAACATCAACAAGAAGATCCGTACGTTGAAAGAGCTCATACCCAATTGCAATAAGATGGATAAGGCTTCAACACTTGATGATGCAATTGACTATCTTAAGACCCTCAAACTTCAGTTACAGATAATGTCAATGGGGAGTGGACTGTGTAATCCAGTGATGATGTTACCATTAATGGGGGCAGCAGGAATGTGCTTGAGGCCTGCAGCAGGAGGGACAGGGTTCCCTTGTAACCCAACAGCACCACAGTTCCCAATTCCACCACTCTCTGCTGTCACAGACACCACACTGCTTAGCATGGTTGGATTCTCCAACCACATGAGACTCATGCCACCAATGCCTCATCCTCATGCCCCTAATTTCATTCCTAATAATAATAGTAATATGAATGCAATGAAGTCTCCTACTCCACCAATCATGCCTGCAGCTGCAGCCATCACCAACCACCTTGTGGGAAATCTAGCTAATCCGGCGGATCTTCATGCAAATACTGAATTTGCAGCAGCAATGCAAGCAACCAGTAATCAGGTTTCCATTCACCATAACAATAGTGTCTATCCCTTTTATTTTCCCACAGGAAAAGATCAGGAAAATAGGAATCTTGGACAAGATGGGAAAACCAGAATAATGTAA 1716 0.4114 MIGMTRSSSLPSLCEKDFLELVWENGQILERGGGSSSNTHHEGRRTRLSRVYSVLDDEFPPHHRDSDLMMMSSSHQSSDQHSCQIDDLHFPPIGKNSLSMLHQEHFANSSRSPSSSSAKESKINNNNNLLCTYSTPSQQCLPTFSSPPKKPRVDHCSTQAAKKPNTQNLGCDINQRTTRKVNFSNFLIPALCLKSSHLQGNIANQQTRNNNNASSSCSARVEEINEAGKVDKTPPAATNHNNNSALRIQVQGSHPVPYYNKTSSSAASKAKGIANNNNNDDEFCNDPLLASSSVCSLEASNDPKISVTKHVHEYTTDDSTYFSDNDEETEDVVKETPPRDLTRVKRCRNPEIHNLSERKRRDNINKKIRTLKELIPNCNKMDKASTLDDAIDYLKTLKLQLQIMSMGSGLCNPVMMLPLMGAAGMCLRPAAGGTGFPCNPTAPQFPIPPLSAVTDTTLLSMVGFSNHMRLMPPMPHPHAPNFIPNNNSNMNAMKSPTPPIMPAAAAITNHLVGNLANPADLHANTEFAAAMQATSNQVSIHHNNSVYPFYFPTGKDQENRNLGQDGKTRIM* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0705 571 CDD bHLH_AtPIF_like 348 410 - -
Aev06g0705 571 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 3 519 - -
Aev06g0705 571 MobiDBLite consensus disorder prediction 318 338 - -
Aev06g0705 571 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 348 397 IPR011598 GO:0046983
Aev06g0705 571 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 348 415 IPR036638 GO:0046983
Aev06g0705 571 Pfam Helix-loop-helix DNA-binding domain 353 397 IPR011598 GO:0046983
Aev06g0705 571 SMART finulus 354 403 IPR011598 GO:0046983
Aev06g0705 571 MobiDBLite consensus disorder prediction 551 571 - -
Aev06g0705 571 Gene3D - 345 405 IPR036638 GO:0046983
Aev06g0705 571 PANTHER TRANSCRIPTION FACTOR PIF3 3 519 IPR044273 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0705 Aev-Chr6 4833879 4836175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0705 289 487 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46970 40.930 1.23e-29 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g0705 HLH 8.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0705 K12126 - gmx:100784724 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0705 06 4833879 4836175 Aev06g0705 06 4833879 4836175 ECH