Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0703 ATGTTAGGCCAGACCAAGAAAGCCAAGAAAGAAAAAGAGAAATACTTTTTGGTTAATTCTTCCCTTCCAAGAAAACTAATTGCAGAGGTTGCATGTGCCGGCCATGGTTGCCACCGTGGAGTGTGGTTTGAAGGATATGAAATTGTGCTAGGTGATCCTAATGATCCTCGTTTTGTATTGTGGAATGGGAGGCTTAGGGCAGTGCCTTCAAAACCCTCTGATTTGGCTTTCTCTGACTTGTTGACCATTGCTGGCAAACTCAGGGCTTCATTTGGTGCGCTTGGGATTCGGTCTCCTCCTCCTCCTCCAGGTCATGAGGAATCGGTTGAAGAGTTTGTGCGTCGAAATCTTGGTGATGAGGTTTTTGAACGCATGATAGAGCCTTTTTGTTCAGGTGTCTATGCAGGTGATCCTTCAAAATTGAGTATGAAATCATCATTTGGGAAAGTTTGGAAGCTGGAGCAAAATGGAGGTAGCATTATCGCTGGCGCTTTCAGAGCATTACAGGAGAGAAACAGAGCTTCTAAACTGCCTCGAGACCTAGGTCTGCCAAAGCCAAAGGGCGAAACTGTTGGATCTTTGCGAAAAGGGCTTGCCATGTTGCCAGAGGCAATTTCTGCAAGGTTGGGTAACAAAGTGAAGTTATCTTGGAAACTTTCAAGTATTAGTAGAGTGGAAAATGGAGAATACAGTTTGACATATGAAACGCCAGAAGGAGTGGTTTCTTTGCAGAGCAGAACTGTTGTCATGACCATCCCTTCCTATGTTGCTAGTACATTGCTGCGCCCTCTATCTACTGCTGCTGCAGATGCACTTTCAAAGATTTATTACCCCCCAGTTGCTGTAATTGCAATATCCTATCCAAACGATGCTATTCGAACAGAGTGCTTAATAGATGGTGAGCTGAAGGGGTTTGGTCAATTGCATCCACGCACCCAAGGAGTGGAAACTTTAGGAACAATATATAGCTCGTCAGTTTTCCCTAATCGATCTCCACATGGACAGGTTCTACTCCTGAATTTCATTGGAGGGGCTACCAATCCTGGAATTGTATCAAAGGTGGATAGCGAACTTGTTGAAGCAGTCGATGGAGACTTGAGAAAAATCCTTATAAACCAAAATGCCAAGGACCCTGTTGTATTGGGAGTGAGAATGTGGCCTAAAGCTATTCCACAGTTTTTAATTGGCCATTTTGATCTGCTAGATGTTGCTAAAGCTGCACTCAAAGATACTGGGTATGAGGGGCTGTTCCTTGGGGGAAACTACGTCTCTGGTGTTGCCTTGGGAGCATGTGTTGAAGGAGCCTCCGAAATAGCAGCCAAAGTTAATGACTTTCTCTCACACATAATAACAGAGCAGAGCAGAATGGGGAAAGCCACAAGCTCTTCTTCCTCGTCCATTAGCAGCAGCAGCAACAGACACCGCCACCGCCAACGCCAACTGGTTATTTCAACTGCATCCTCTCTCACACAACAACAACAACTCCCCACCGATCTCAGCCTTGGACTCGGTATCCCCACCACCCAACATCATGTTGGTTCTTCCTTTTCAAGGGGGCAATGGCAACAGCAGCAGCAACAGGAACAAGAGCAACAGTACCAAATGCAGCCATTTATGATGATGAACAACGGTGGTGGTGATTATTGTGGCGGCGAGAATAGCAGCTTCTTTGTGAAGGTGTACATGGAAGGGATTCCAATAGGGAGGAAGCTCAACATATTGGCTCATGAAAGCTACCACGACCTTGTCAGCACTCTTGAGAACATGTTCGACACTACCATCCTCTGGGGAACAGAGATGGACGGAGTGCAACCAGAGAGATGCCATGTTCTGACATACGAAGACGAAGAAGGGGATTTGGTCATGGTTGGAGATGTCCCTTGGGAGATGTTCGTATCCGCTGTAAAGAGGTTGAAGATCACAAGGGTAGACGCATTCGGCTGTTGA 1947 0.4612 MLGQTKKAKKEKEKYFLVNSSLPRKLIAEVACAGHGCHRGVWFEGYEIVLGDPNDPRFVLWNGRLRAVPSKPSDLAFSDLLTIAGKLRASFGALGIRSPPPPPGHEESVEEFVRRNLGDEVFERMIEPFCSGVYAGDPSKLSMKSSFGKVWKLEQNGGSIIAGAFRALQERNRASKLPRDLGLPKPKGETVGSLRKGLAMLPEAISARLGNKVKLSWKLSSISRVENGEYSLTYETPEGVVSLQSRTVVMTIPSYVASTLLRPLSTAAADALSKIYYPPVAVIAISYPNDAIRTECLIDGELKGFGQLHPRTQGVETLGTIYSSSVFPNRSPHGQVLLLNFIGGATNPGIVSKVDSELVEAVDGDLRKILINQNAKDPVVLGVRMWPKAIPQFLIGHFDLLDVAKAALKDTGYEGLFLGGNYVSGVALGACVEGASEIAAKVNDFLSHIITEQSRMGKATSSSSSSISSSSNRHRHRQRQLVISTASSLTQQQQLPTDLSLGLGIPTTQHHVGSSFSRGQWQQQQQQEQEQQYQMQPFMMMNNGGGDYCGGENSSFFVKVYMEGIPIGRKLNILAHESYHDLVSTLENMFDTTILWGTEMDGVQPERCHVLTYEDEEGDLVMVGDVPWEMFVSAVKRLKITRVDAFGC* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0703 648 SUPERFAMILY CAD & PB1 domains 552 640 - -
Aev06g0703 648 Pfam AUX/IAA family 493 642 IPR033389 -
Aev06g0703 648 PANTHER PROTOPORPHYRINOGEN OXIDASE 48 446 - -
Aev06g0703 648 MobiDBLite consensus disorder prediction 456 471 - -
Aev06g0703 648 SUPERFAMILY FAD/NAD(P)-binding domain 55 442 IPR036188 -
Aev06g0703 648 SUPERFAMILY FAD-linked reductases, C-terminal domain 276 392 - -
Aev06g0703 648 PANTHER PROTOPORPHYRINOGEN OXIDASE 48 446 - -
Aev06g0703 648 MobiDBLite consensus disorder prediction 510 529 - -
Aev06g0703 648 TIGRFAM proto_IX_ox: protoporphyrinogen oxidase 48 447 IPR004572 GO:0004729|GO:0006779
Aev06g0703 648 ProSiteProfiles PB1 domain profile. 555 645 IPR000270 GO:0005515
Aev06g0703 648 Gene3D - 550 647 - -
Aev06g0703 648 Gene3D Protoporphyrinogen oxidase, mitochondrial; domain 2 49 395 - -
Aev06g0703 648 Pfam Flavin containing amine oxidoreductase 50 436 IPR002937 GO:0016491
Aev06g0703 648 Gene3D protoporphyrinogen ix oxidase, domain 3 68 170 - -
Aev06g0703 648 MobiDBLite consensus disorder prediction 456 480 - -
Aev06g0703 648 Gene3D - 193 439 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0703 Aev-Chr6 4823751 4830786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0703 530 640 B3 DNA Binding Superfamily AT5G62000 30.702 1.05e-10 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Aev06g0703 Amino_oxidase 2.3e-59 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0703 K00231 - gmx:100810190 659.833