LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g0701	ATGGACTTCTTCTCCTCATCATCTCATGATAACAACAATAGCAACAAAATTATTGTTGATGATACCAATAATCATGACCACCATCATCATCAAGATCATGACACTCATCATCGCCATGCCACCACCGCCAAAGACGGATCATCCACTCTCCTCACTGTAAACACCGGACTGAATTTGACGTGTGCAAACAATAGTAGCATCTTAAAGGGTGCAGAAAATGGTGAAAATCCTGAAACTGAGGTGAGCATGATGCAAAGTGAATTGAGGAGAGTGCAAGAAGAGAATCGGAAGTTGAGAACTGTGCTGGATCAGATCACAAAAAGTTATAGCCAACTCCAAGCTCAGCTGTTCATGGCTTTGCAGAAACAGAAAATCACTCATCAGAGTAATGTGAAAGGAAATGGTGGTGGGATGGTATATGTAGAAAAGAATGGGGACCCACAAGGATGCAGAAAAGTAGACATGAATGATGGTTCGGTTTGGGATGAAAAGACGGATCGAGAGGTATCGATTTCACCATCCAACAATGGGGAGGTAATGTCAAAGCAGAAGAAGAATGACCTTCTGACTACACTTCATCTTGGAAAGCAGCAGGAGGAGGCTTGTCCTGCAGAAGACGGGTCGTCGTCTCAGAGCTGGGGCTCTACCAAAAGCCCCAATCCGGAAGATGATTCCAAACCTGCCCAACAGGTTCCCGGTGAGCTTCCTTTCAGGAAGGCTAGAGTCTCCGTGCGTGCAAGATCAGAAGCTCCTCTGATCAGCGACGGATGTCAGTGGAGGAAATACGGACAAAAAATGGCCAAGGGTAACCCCAGTCCTCGTGCCTACTACCGTTGCACTATGGCTGCTGGATGCCCAGTGCGCAAACAGGTGCAAAGGTGCGCAGAGGACAGCACAGTGCTGGTAACAACATACGAAGGGAACCACAACCACCCTCTGCCACCCGCAGCAACAGCCATGGCCAACACTACATCAGCTGCAGCAGCAATGCTTCTCTCAGGATCAACAACCTCCTCAGCACCAGCAGCGCCTCCATACTTCCATCCAGTGGCAACACTATCAGCCTCAGCACCATTCCCAACCATAACCCTAGACCTCACCCACACCCCCAATTCCCTTAATCTCCACCGCGTTCCACCTCTCACTGCCTTCCCACTCCCACTCCATGCCAGTACTAGTCCTCCTCCTCCTCATCAGATTCTAGGGCACCCGTTGTTGATCCCGCAGCAGAGGCTTCCGCCGGCGGCTATGGCGCAATTGGTTCAGCCGCCGTCGTCGTCGTCTATGGTGGATACAGTGAGTGCAGCAATTGCGTCGGATCCCAACTTCACTGCAGCAGTGGCAGCAGCACTATCATCAATGATTGGGGCGCAGAGATCATCATCATCATCAGCCACTCATAATGGGAACACCAATGTTGGCATCAGTAACGGCGGTGGTGGAGGAATAATAAGTGCTTTTACTAATCTGCAGGGTAGTAATGGTAAATCTGCGTCGCCGCCTGCAGCTGGGTCACCGCAGCTTCCTCAGTCATGTACTACATACTCCACCCACTAG	1557	0.5016	MDFFSSSSHDNNNSNKIIVDDTNNHDHHHHQDHDTHHRHATTAKDGSSTLLTVNTGLNLTCANNSSILKGAENGENPETEVSMMQSELRRVQEENRKLRTVLDQITKSYSQLQAQLFMALQKQKITHQSNVKGNGGGMVYVEKNGDPQGCRKVDMNDGSVWDEKTDREVSISPSNNGEVMSKQKKNDLLTTLHLGKQQEEACPAEDGSSSQSWGSTKSPNPEDDSKPAQQVPGELPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPSPRAYYRCTMAAGCPVRKQVQRCAEDSTVLVTTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTTSSAPAAPPYFHPVATLSASAPFPTITLDLTHTPNSLNLHRVPPLTAFPLPLHASTSPPPPHQILGHPLLIPQQRLPPAAMAQLVQPPSSSSMVDTVSAAIASDPNFTAAVAAALSSMIGAQRSSSSSATHNGNTNVGISNGGGGGIISAFTNLQGSNGKSASPPAAGSPQLPQSCTTYSTH*	519

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev06g0701	518	MobiDBLite	consensus disorder prediction	198	237	-	-
	Aev06g0701	518	MobiDBLite	consensus disorder prediction	143	183	-	-
	Aev06g0701	518	MobiDBLite	consensus disorder prediction	203	225	-	-
	Aev06g0701	518	Gene3D	WRKY domain	238	315	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Aev06g0701	518	MobiDBLite	consensus disorder prediction	491	518	-	-
	Aev06g0701	518	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	1	517	IPR044810	GO:0003700
	Aev06g0701	518	ProSiteProfiles	WRKY domain profile.	248	314	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev06g0701	518	MobiDBLite	consensus disorder prediction	1	19	-	-
	Aev06g0701	518	Pfam	WRKY DNA -binding domain	255	312	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev06g0701	518	SMART	WRKY_cls	253	313	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev06g0701	518	Coils	Coil	81	115	-	-
	Aev06g0701	518	SUPERFAMILY	WRKY DNA-binding domain	246	314	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Aev06g0701	518	MobiDBLite	consensus disorder prediction	20	43	-	-
	Aev06g0701	518	MobiDBLite	consensus disorder prediction	1	44	-	-
	Aev06g0701	518	PANTHER	WRKY TRANSCRIPTION FACTOR 47-RELATED	1	517	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g0701	Aev-Chr6	4802530	4805674	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g0701	80	455	WRKY Transcription Factor Family	AT4G04450	43.142	1.17e-78	251

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Aev06g0701		WRKY	8.6e-25	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g0701	-		-	gmx:100783661	449.129