Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0692 ATGAGTGGCAAGGTCATAGGCGCTATCGTCGGCCTTCTCATGGTAGTTGGCATTGCCATCGGTGTCGTGGTCATTGTGAACAGGAGCAATGAGATTAACAATGCTGGCGAGGTAAAGTCGGCCAACAAGGCGATTACGACCTTGTGCTCCGGCGCAGATGACAAGCAACTCTGCAACGATGTCTTAAGCACCGTTAACTCCACAAACCCAAAGGATTATATTGCCGCCGTCTTAAAAGCCTCAACTCAAACCGTTATCAAGGCGATGAACATGAGCGACCAACTCACCGTCGAGAATGGCAATAGTGAAGCTGGGATCAAGATGGCACTTGACGACTGCAAGGACCTCTTGCAATCCGCCATCCATGAACTCGAGGCTACTGGCCTTTTCTTAGAGAGCTCCAATGTCTCTGACATCTTCAAACGCTCCTCTGACCTCAAGATGTGGTTTGGCTCTGTCATTGCCTACCAGCAATCTTGTCTGGATGGCTTCAACACCGACGGTGAGAAAGAGATCCAGACAACATTACAAGCAGATAGCATGGACAGTGTCATGAAGGTCACAGCTTTGGCACTTGATGTAGTGAGTGGGATCACCGGTGTTCTTGGTCAATTTGGGTTTAGTTTGAATCTGAAGAAGCCAGCAAGGCGCCTTCTTTTCGATGTGGATAATTTGGGTTTGCCTACTTGGTTATCTACCGCTGACCGTAAGCTATTGGACACCGTTGACATAAGTTCAATTAAGCCTAACGCAACTGTTGCAAAGGATGGCAGTGGACAGTTTAAGACCATTGCTGATGCTCTTAACTCTTACCCTAAGAAGCCCAATGGGAGGTTTGTTATCTATGTTAAGGAAGGTACCTATGATGAGTACATTACCGTTGACAAGAAGAAGCCCAATATCTTCATGTATGGTGATGGCCCTAACAAGACCATCATCACCGGTCGCAAGAACTTTGCTGAGGGTGTCAAGACCATGAGGACCGCCACCTTCTCCACGGTTGCCGATGGGTTCATTGCGAAGAGTATGGCATTCGAGAACACCGCAGGAGCAGCCGGTCACCAAGCAGTGGCCCTCCGCGTTCAAGGCGACTACTCAGCTTTCTTTGACTGCGCAATCCGCGGTTACCAAGACACACTATACGCACACGCCCACCGTCAATTCTACCGCAACTGTGAGATCTCCGGCACCATCGACTTCATCTTCGGTTACGCCGCAGTGCTGATCCAGAACTCCAAGATCATCGTGAGGAAGCCAGGCTCCAACCAACAAAACATCGTGGTGGCTGACGGCACAGACCAGAAGAACATGCCCACCGGAGTAGTCCTCCAGAACTGCGAGATCAAGCCAGATGAGTCACTCCAGAACGACAGGTTGACTGTGAAGTCATACCTCGCGAGGCCATGGAAGGCATTCTCAAGGGCAGTGTTCATTGAGAATGAGATTGGCGATCTTATCCACAAAGATGGTTACATTCCATGGTCAACAGAGATGCCTAACACTGAGAACTCTTTCTTTGCTGAGTTTGGAAACACTGGAGCTGGATCTGATGCTTCTGCAAGGGCTAAATTCGCTAAGGGTGTCATTTCTAAGGATGTTGCTGCTAAATTTACCGCTGAACCTTTCCTCCAAGCTAGTACTTGGTTGCCTGCTACTGGCTTCCCCTACGATTCTACCTTCACCAAGAATTAA 1692 0.4905 MSGKVIGAIVGLLMVVGIAIGVVVIVNRSNEINNAGEVKSANKAITTLCSGADDKQLCNDVLSTVNSTNPKDYIAAVLKASTQTVIKAMNMSDQLTVENGNSEAGIKMALDDCKDLLQSAIHELEATGLFLESSNVSDIFKRSSDLKMWFGSVIAYQQSCLDGFNTDGEKEIQTTLQADSMDSVMKVTALALDVVSGITGVLGQFGFSLNLKKPARRLLFDVDNLGLPTWLSTADRKLLDTVDISSIKPNATVAKDGSGQFKTIADALNSYPKKPNGRFVIYVKEGTYDEYITVDKKKPNIFMYGDGPNKTIITGRKNFAEGVKTMRTATFSTVADGFIAKSMAFENTAGAAGHQAVALRVQGDYSAFFDCAIRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYAAVLIQNSKIIVRKPGSNQQNIVVADGTDQKNMPTGVVLQNCEIKPDESLQNDRLTVKSYLARPWKAFSRAVFIENEIGDLIHKDGYIPWSTEMPNTENSFFAEFGNTGAGSDASARAKFAKGVISKDVAAKFTAEPFLQASTWLPATGFPYDSTFTKN* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0692 563 Pfam Pectinesterase 250 545 IPR000070 GO:0030599|GO:0042545
Aev06g0692 563 ProSitePatterns Pectinesterase signature 1. 275 294 IPR018040 -
Aev06g0692 563 SUPERFAMILY Pectin lyase-like 247 558 IPR011050 -
Aev06g0692 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 198 IPR035513 -
Aev06g0692 563 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Aev06g0692 563 Gene3D - 244 560 IPR012334 -
Aev06g0692 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 195 IPR035513 -
Aev06g0692 563 TIGRFAM PME_inhib: pectinesterase inhibitor domain 35 194 IPR006501 GO:0004857
Aev06g0692 563 PANTHER PECTINESTERASE 6 560 - -
Aev06g0692 563 CDD PMEI-like_3 47 200 - -
Aev06g0692 563 Pfam Plant invertase/pectin methylesterase inhibitor 44 193 IPR006501 GO:0004857
Aev06g0692 563 PANTHER PECTINESTERASE 6 560 - -
Aev06g0692 563 SMART PMEI_2 40 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0692 Aev-Chr6 4744720 4747422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0692 42 555 Carbohydrate Esterase AT2G26450 41.267 3.29e-129 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0692 K01051 - gmx:100808559 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0692 06 4744720 4747422 Aev09g1341 09 17211674 17215980 PCT
Aev09g1342 09 17241079 17244803 Aev06g0692 06 4744720 4747422 PCT