Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0687 ATGGAAGCTAGATTTGGAACTGAAGCTCTTCAATTCTATGGTATGGGTGGGTCCTCTGTGGGGAAGAGGACCATGGAGTGGGATTTGAACGATTGGAAATGGGATGGTGATCTTTTCATAGCTAGGTCTTTGAATCCTGTACCTGAGCACAGGCAATTCTTACCTACTGGGTCTGGGATCCCTGTGGCTGGGGGTTCCTCCAACTCTAACAGCTCATCTTCGTGCTCTGATGAGGTAGATCTCGGGATTCGCGGAGGGAACAAGGAAGGGGAGAGGAAGAGGAGGGTTATTGTTCTGGAGGATGATGCTTTGAATGAGGAAGCTGGCTCACTTAGCTTAAAGCTTGGTGGTGGTAGTGGCGGTGTTGGTGGTGGGCATGGTGCCCCAATTGCAAGCTGGGAAGGAGTTAACGGGAAGAAGAGCAGGGTAGCTGGAGGTAATTCAAATCGGGCTGTTTGTCAGGTGGGGGATTGTGGTGCGGATCTCAGCAATGCCAAAGATTATCATAGGCGCCACAAAGTTTGTGAGATGCACTCCAAGGCCAGCAAGGCACTTGTGGGAAACGCAATGCAGCGGTTCTGCCAGCAATGCAGTAGGTTTCACATGCTTCAAGAGTTTGATGAAGGAAAGAGAAGCTGTCGAAGACGTTTGGCAGGCCATAATAAACGAAGGAGGAAAACTAATAATGATGCTGTTCCTAATGGAAATCCGATAAATGATGATCAGACTAGTAGTTATCTGTTGATTAGTTTATTGAAGATAATTTCAAATATGCATTCTGACAGGTCAGATCAGACCACAGATCAGGATATGCTGACTCATCTGTTAAGGAGTCTTGCCAGTCAGAGTGGTGATCAAGGGGGTAAGAACTTATCGAACCTATTGCGGGAGCCAGAGAATTTGTTGAAAGAAGGGAGTTCGTCAGGGAAATCTGAGATGATTTCTACTTTATTCTCAAATGGTTCTCAAGGCTCTCCAACTGTTACAAGACAGCATCAAACACTTTCTATTGCTGAAGTTCAACATCAAGGGATGCATTCACATGATGCTAGGGCTGCTGATCGACAAACCATGTCTTCTACAAAGCCTAGTGCTTCAAATAGTCCACCAACTTACTCAGAAGCCAGAGACAGTACTGCTGGACAGCCCAAGATGAATAATTTTGATTTGAATGATATATACATTGACTCAGATGATGGCATCGAAGATGTAGAAAAGTTGCCTGTCTCTGCAAATCTGGGTACTAGTTCTCTTGATTATCCATGGATTCAACATGATTCTCATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCAGATTCTGCATCTGCGCAGTCCCCTTCTAGCTCAAGTGGAGAAGCTCAGAGTCGCACAGATCGCATTGTTTTTAAACTCTTTGGTAAAGATCCAAATGATTTTCCTCTTGTACTTAGAGCACAGATTCTTGACTGGTTATCCCACAGTCCTACTGATATGGAAAGCTACATACGGCCTGGTTGTATTGTTTTGACCATTTATCTGCGTCAATCCGAGGCTATGTGGGAGGAGCTTTGCTATGATCTGTCTTCCAGCTTGAATAGGCTTTTGGATGTCTCAGATGATGTTTTTTGGAGAAGTGGATGGGTTCACATCAGGGTGCAGCAGCAGATAGCCTTTGTTTTCAATGGTCAGGTTGTCATAGATACATCCTTACCTTTCAGAAGTAACAGTTATAGTAAGATTCTTAGTGTCAGTCCAATTGCTGTACCAGCTTCAAAGACAGCTCAATTTTCTGTTAAGGGTATCAACCTGATTCGCCCAGCCACTAGGTTACTGTGTGCTTTAGAGGGGAATTATCTGGTCTCTGAAGATGCTCATGAGTCATTGGATCAATCCTCCAAGGAGCTTGAAGAGCTTCAGTGCATCCGATTTTCATGTTCAGTCCCTGTGATGAATGGAAGGGGGTTTTTTGAGATTGAGGACCAGGGTTTGAGCAGCAGCTTTTTTCCTTTCATAGTTGCAGAGGAGGAGGTTTGCTCTGAAATCTGTGTGCTTGAACCTTTACTAGAATTAAATGATACTGATCCAGATATTGAAGAAGCTGGAAAAATTAAAGCCAAAAATCAAGCCATGGATTTCATTCATGAGATGGGTTGGCTTCTTCACAGAAGCCAATTGAAATCTAGGATGGTTCACTTGAACTCTAGTGCAGAACAATTTCCATTAAAACGATTCAAGTGGCTCATCGAGTTCTCTATGGACCGTGATTGGTGTGCAGTAGTAAAAAAACTATTGAACCTACTGCTTAGTGGAACTGTGAATACAGGAGATCATCCTTCCTTGGATCTCACACTTTCAGAGTTGGGTCTCCTTCATAGAGCTGTCAGGAGAAATAGCAGGCAGTTGGTGGAGCTACTTTTGAGATATGTTCCTGAGAATATTTCTGATAATCTAGGAGCTGAAGACAGGACTCTGGTTGGTGGAGAGAATCAGAACTTCTTGTTTAGACCTGATGTTCTCGGTCCTGCTGGTTTGACGCCACTCCATATAGCAGCTGGGAAAGATGGTTCTGAGGATGTATTGGATGCTTTAACCAATGATCCTTGCATGGTGGGAATCGAAGCATGGAAGAGTGCTCGTGACAGCACGGGCTCCACACCTGAGGATTATGCACGTTTACGTGGCCATTATGCCTACATTCACCTGGTTCAGAAGAAAATCAACAAGAGACAAGGAGGAGCTCATGTTGTGGTTGAGATTCCCAGCAATCTGTCTGGGTTAAGCACAAGCCAGAAGCAGAATGAGTTGTCCACCAGTACCTTCGAGATTGGAAAGTCTGAAGAAAAAAGTGTCCAAAAGCAATGCAAAATATGTGATCATAATAAGTTGTCCTGTAGGACTGTAGTAGGCAAGTCTTTGGTATACAGACCTGCTATGCTGTCAATGGTGGCCATAGCCGCGGTCTGTGTCTGTGTGGCCCTTCTGTTTAAGAGCTCGCCGGAAGTTCTGTACGTGTTCCAGCCATTCAGGTGGGAAAACTTGGAGTACGGAACAAGTTGA 3039 0.4449 MEARFGTEALQFYGMGGSSVGKRTMEWDLNDWKWDGDLFIARSLNPVPEHRQFLPTGSGIPVAGGSSNSNSSSSCSDEVDLGIRGGNKEGERKRRVIVLEDDALNEEAGSLSLKLGGGSGGVGGGHGAPIASWEGVNGKKSRVAGGNSNRAVCQVGDCGADLSNAKDYHRRHKVCEMHSKASKALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNNDAVPNGNPINDDQTSSYLLISLLKIISNMHSDRSDQTTDQDMLTHLLRSLASQSGDQGGKNLSNLLREPENLLKEGSSSGKSEMISTLFSNGSQGSPTVTRQHQTLSIAEVQHQGMHSHDARAADRQTMSSTKPSASNSPPTYSEARDSTAGQPKMNNFDLNDIYIDSDDGIEDVEKLPVSANLGTSSLDYPWIQHDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRAQILDWLSHSPTDMESYIRPGCIVLTIYLRQSEAMWEELCYDLSSSLNRLLDVSDDVFWRSGWVHIRVQQQIAFVFNGQVVIDTSLPFRSNSYSKILSVSPIAVPASKTAQFSVKGINLIRPATRLLCALEGNYLVSEDAHESLDQSSKELEELQCIRFSCSVPVMNGRGFFEIEDQGLSSSFFPFIVAEEEVCSEICVLEPLLELNDTDPDIEEAGKIKAKNQAMDFIHEMGWLLHRSQLKSRMVHLNSSAEQFPLKRFKWLIEFSMDRDWCAVVKKLLNLLLSGTVNTGDHPSLDLTLSELGLLHRAVRRNSRQLVELLLRYVPENISDNLGAEDRTLVGGENQNFLFRPDVLGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKSARDSTGSTPEDYARLRGHYAYIHLVQKKINKRQGGAHVVVEIPSNLSGLSTSQKQNELSTSTFEIGKSEEKSVQKQCKICDHNKLSCRTVVGKSLVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFQPFRWENLEYGTS* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0687 1012 MobiDBLite consensus disorder prediction 356 386 - -
Aev06g0687 1012 Pfam SBP domain 153 226 IPR004333 GO:0003677
Aev06g0687 1012 Gene3D - 144 214 IPR036893 GO:0003677|GO:0005634
Aev06g0687 1012 MobiDBLite consensus disorder prediction 61 78 - -
Aev06g0687 1012 MobiDBLite consensus disorder prediction 304 341 - -
Aev06g0687 1012 ProSiteProfiles Zinc finger SBP-type profile. 150 227 IPR004333 GO:0003677
Aev06g0687 1012 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 15 1011 - -
Aev06g0687 1012 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 15 1011 IPR044817 GO:0003677
Aev06g0687 1012 MobiDBLite consensus disorder prediction 302 391 - -
Aev06g0687 1012 MobiDBLite consensus disorder prediction 217 239 - -
Aev06g0687 1012 SUPERFAMILY SBT domain 151 231 IPR036893 GO:0003677|GO:0005634
Aev06g0687 1012 MobiDBLite consensus disorder prediction 55 87 - -
Aev06g0687 1012 MobiDBLite consensus disorder prediction 420 456 - -
Aev06g0687 1012 Gene3D - 751 909 IPR036770 -
Aev06g0687 1012 SUPERFAMILY Ankyrin repeat 760 896 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0687 Aev-Chr6 4704139 4709106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0687 1 1012 SBP-box Gene Family AT3G60030 54.864 0.0 993
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev06g0687 SBP 2.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0687 - - gmx:100809806 1601.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0687 06 4704139 4709106 Aev06g0687 06 4704139 4709106 ECH