Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0682 ATGATGGCATCAGCGGGTGTAGCACCTGCTTCTGGAGTAACTGATATGAATTCAAGTTCAGTTGGTGTTGAAAGGTTACCTGATGAGATGAATGACATGAGGATCAGAGATGATAAGGAAATGGAACCAGCCATTGTAGATGGAAATGGGACCGAAACAGGACATATAATTGTGACTACCATTGGTGGTAAAAATGGCCAGCCCAAGCAGACTATAAGCTACATGGCTGAGCGTGTTGTTGGACATGGATCTTTTGGTGTAGTTTTCCAGGCAAAGTGCTTGGAGACGGGTGAAACTGTTGCTATTAAGAAGGTTCTTCAAGACAAGCGATACAAGAACAGGGAATTGCAAACCATGCGCCTTCTAGACCACCCTAATGTTCTGTCTTTGAAGCATTGTTTCTTCTCAACAACTGAAAAAGATGAGCTTTATCTTAACTTGGTGCTTGAGTTTGTTCCTGAGACTGTCAATCGGGTGATCAGACACTACAACAAAGTGAATCAAAGGATGCCATTGATATATGTAAAACTTTATGCTTATCAGATATGCAGAGCACTTGCTTATCTTCACAACAGCATTGGAGTTTGCCACAGGGACATAAAACCTCAAAATTTACTGGTTAATCCTCACACCCACCAGCTGAAGATATGTGACTTTGGAAGTGCTAAAGTCTTGGTAAAAGGAGAACCAAACATTTCTTACATCTGTTCTAGGTACTATAGAGCTCCTGAACTTATATTTGGGGCAACTGAGTACACCACAGCCATTGACATCTGGTCAGCTGGTTGTGTACTTGGTGAACTATTGCTTGGCCAGCCTCTCTTTCCTGGCGAGAGTGGAGTCGATCAGCTTGTGGAAATCATCAAGGTTTTAGGTACACCAACAAGGGAAGAAATAAAGTGCATGAATCCTAACTACACAGAGTTTAAATTTCCTCAAATTAAAGCTCATCCATGGCACAAGATCTTTCACAAGCGGATGCCACCTGAAGCTGTGGATCTTGTCGCAAGACTACTGCAATACTCTCCAAATCTTCGAAGCACAGCTTTGGAGGCTCTTGTTCATCCATTCTTTGATGAGTTGCGTGATCCAAATACCCGCTTGCCAAATGGGCGCTTCCTCCCTCCACTATTTAACTTCAAAGCCAATGAACTCAAGGGAGTGCCTGAGGAGATGCTGGTGAAGCTGATTCCGCCTCATGCAAGAAAGCAGTGCGCCTTCCTCGGATCCTAA 1233 0.4355 MMASAGVAPASGVTDMNSSSVGVERLPDEMNDMRIRDDKEMEPAIVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVLSLKHCFFSTTEKDELYLNLVLEFVPETVNRVIRHYNKVNQRMPLIYVKLYAYQICRALAYLHNSIGVCHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLGELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVARLLQYSPNLRSTALEALVHPFFDELRDPNTRLPNGRFLPPLFNFKANELKGVPEEMLVKLIPPHARKQCAFLGS* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0682 410 SUPERFAMILY Protein kinase-like (PK-like) 73 383 IPR011009 -
Aev06g0682 410 ProSitePatterns Protein kinases ATP-binding region signature. 80 104 IPR017441 GO:0005524
Aev06g0682 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Aev06g0682 410 ProSiteProfiles Protein kinase domain profile. 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0682 410 Gene3D Phosphorylase Kinase; domain 1 58 153 - -
Aev06g0682 410 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 2 408 - -
Aev06g0682 410 SMART serkin_6 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0682 410 MobiDBLite consensus disorder prediction 1 28 - -
Aev06g0682 410 Pfam Protein kinase domain 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0682 410 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 2 408 - -
Aev06g0682 410 CDD STKc_GSK3 69 361 IPR039192 -
Aev06g0682 410 Gene3D Transferase(Phosphotransferase) domain 1 154 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0682 Aev-Chr6 4660123 4662717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0682 80 366 Core Cell Cycle Gene Families AT1G76540 33.559 9.16e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Aev06g0682 Pkinase 5.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0682 K00924 - gmx:100788046 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0682 06 4660123 4662717 Aev06g0682 06 4660123 4662717 ECH