Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0658 ATGTCGAAGAGGAAGTTCGGATTCGAAGGTTTCGGCATAAACCGCCAATCCACCTACAACTTCGAGCGATCCCAAGCTCCTCAGAGGCTCTATGTGCCTCCCTCCTCCCGCCACGGCCATGACAATTACGAGGACACCGACCTCGACAACATCGAGTACGACGATAACGATGCCGCCGGAAACGAGGACAACAACAACGCCACTGCCGGAAATAGCGGTGCTGGCGACGACGAAATTGATCCGCTCGATGCGTTCATGGAAGGGATTCACGAGGAGATGAAGGCGGCGCCGCCTCCGCAGGCGAAGGAGAAGGTGGAAGACAGGTACAAGGACGACGAGGATGACGATCCAATGGAGAGCTTCTTGAGGGCGAAGAAGGACCTTGGGTTGACGCTTGCGTCCGAGGCTCTTCATGCTGGGTATGATTCTGATGAAGAGGTTTATGCCGCTGCGAAAGCCGTGGACGCTGGTTTGATAGAGTATGATTCCGATGATAACCCTATTGTTCTTGACAAGAAGAAGATCGAGCCCATACCTTCTCTTGATCACAGTTCTATTGATTACGAGCCCTTCAACAAGGATTTCTATGAGGAGGCACCTTCAATTTCAGGTATGAGTGAGCAAGATGTAACTGAATACAGGAAGAGTTTGGCTATCCGTGTGTCGGGATTTGATGTGCCTAAACCAATTAAGACATTTGAGGACTGTGGATTTTCTTCTCAAATTATGAGTGCTATAAAGAAACAAGGGTATGAGAAGCCCACATCTATACAGTGCCAGGCTCTACCAGTTGTGCTTTCTGGTAGAGATATCATTGGTATAGCAAAAACTGGTTCTGGTAAGACTGCTTCTTTTGTGCTTCCCATGGTCGTGCATATCATGGATCAGCCTGAGCTTAAGAAGGAGGAGGGTCCTATTGGAGTTATATGTGCACCTACTAGAGAACTGGCACAGCAGATATATCTGGAGGCCAAGAAATTTGCAAAAGCATATGGTATACGTGTCTCTGCTGTCTATGGTGGAATGTCTAAACTTGACCAGTTCAAAGAACTCAAGGCAGGCTGTGAGATAGTTGTTGCTACCCCTGGCAGATTGATAGACATGCTAAAAATGAAGGCATTGACTATGACGAGAGCAACTTACCTGGTGCTTGATGAGGCTGATCGGATGTTTGATCTTGGATTTGAGCCACAAGTAAGGTCCATTGTTGGTCAAATTAGGCCAGACCGCCAGACATTACTCTTCTCTGCAACAATGCCTCGTAAAGTTGAAAAATTGGCCAGAGAAATCCTTAGTGATCCTATTAGAGTAACAGTTGGGGAGGTGGGAATGGCAAATGAAGACATTACTCAAGTTGTTCAAGTAATTCCTTCCGATAATGAAAAGTTTCCATGGCTTCAGGAGAAGCTACCTGAAATGATTGATCAGGGTGATGTCCTAGTATTTGCTTCCAAGAAGGCTACTGTGGATGAAATTGAATCACAATTGTCTCAGAGAGGCTTTAAAGTTGCTGCGCTGCATGGTGATAAAGATCAAGCTTCTCGTATGGATATTTTGCAGAAGTTTAAATCTGGCATCTACCATGTGCTTATTGCTACTGATGTTGCTGCTCGTGGTCTTGATATCAAGTCAATTAAGTCAGTGGTAAACTTTGATATTGCAAAAGATATGGACATGCATGTCCATCGCATTGGAAGAACAGGCCGTGCTGGGGACAAGGATGGTACTGCATACACTCTCATAACTCAGAAAGAAGCACGGTTTGCAGGTGAGCTGGTTAATAGCTTGATTGCTGCCGGCCAGAACGTATCAACGGAGTTGATGGATCTTGCTATGAAGGATGGGAGATTCAGATCAAAACGTGACGCCAGAAAAGGAGGTGGTAGAAAAGGCAAAGGGAGAGGTGGTGGCGGCGGCGGTGGTGGTAATGGTCGGGGTGTGCGTGGAGTGGATTTCGGCCTGGGTATCGGATATAACCCTGAGTCAAACACTCCATCATCTAACTCCACTCCAAGCCGTTCTGCTGCAGTGAATTCTTTGCGAACAGGAATTATGTCACAATTTAGGAGCAGCTTCGTTGCTGCATCGTCGAACACTCAAAATCCAGGATTCAGTAGCAATACAAGCATGGCACCTGCACCTGGTTATAAGAGACCAGCACTCCCTGGCTTTGTATCTGGTGGATCAATTGGCGGGGATATAAATGCTCATCAGAAGACTACTTCATCAGCGGGGCAGCATTCCAGTGGTCAAAATTATGGAGCAAATCCCTCTCAAAGTAGCTCAAACAGCAGTTCTAAACCTAGAGAGAGGAGGAGGCCATCAGGCTGGGATAGATAG 2340 0.4684 MSKRKFGFEGFGINRQSTYNFERSQAPQRLYVPPSSRHGHDNYEDTDLDNIEYDDNDAAGNEDNNNATAGNSGAGDDEIDPLDAFMEGIHEEMKAAPPPQAKEKVEDRYKDDEDDDPMESFLRAKKDLGLTLASEALHAGYDSDEEVYAAAKAVDAGLIEYDSDDNPIVLDKKKIEPIPSLDHSSIDYEPFNKDFYEEAPSISGMSEQDVTEYRKSLAIRVSGFDVPKPIKTFEDCGFSSQIMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTASFVLPMVVHIMDQPELKKEEGPIGVICAPTRELAQQIYLEAKKFAKAYGIRVSAVYGGMSKLDQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQVIPSDNEKFPWLQEKLPEMIDQGDVLVFASKKATVDEIESQLSQRGFKVAALHGDKDQASRMDILQKFKSGIYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGTAYTLITQKEARFAGELVNSLIAAGQNVSTELMDLAMKDGRFRSKRDARKGGGRKGKGRGGGGGGGGNGRGVRGVDFGLGIGYNPESNTPSSNSTPSRSAAVNSLRTGIMSQFRSSFVAASSNTQNPGFSSNTSMAPAPGYKRPALPGFVSGGSIGGDINAHQKTTSSAGQHSSGQNYGANPSQSSSNSSSKPRERRRPSGWDR* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0658 779 MobiDBLite consensus disorder prediction 696 779 - -
Aev06g0658 779 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 383 391 IPR000629 -
Aev06g0658 779 MobiDBLite consensus disorder prediction 614 676 - -
Aev06g0658 779 MobiDBLite consensus disorder prediction 1 80 - -
Aev06g0658 779 SMART ultradead3 250 452 IPR014001 -
Aev06g0658 779 MobiDBLite consensus disorder prediction 733 765 - -
Aev06g0658 779 CDD SF2_C_DEAD 449 581 - -
Aev06g0658 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 440 IPR027417 -
Aev06g0658 779 MobiDBLite consensus disorder prediction 696 712 - -
Aev06g0658 779 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 465 611 IPR001650 -
Aev06g0658 779 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 262 437 IPR014001 -
Aev06g0658 779 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 45 663 - -
Aev06g0658 779 MobiDBLite consensus disorder prediction 13 31 - -
Aev06g0658 779 Pfam DEAD/DEAH box helicase 255 426 IPR011545 GO:0003676|GO:0005524
Aev06g0658 779 MobiDBLite consensus disorder prediction 659 676 - -
Aev06g0658 779 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 231 259 IPR014014 GO:0003724
Aev06g0658 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 378 611 IPR027417 -
Aev06g0658 779 SMART helicmild6 490 571 IPR001650 -
Aev06g0658 779 Pfam Helicase conserved C-terminal domain 472 571 IPR001650 -
Aev06g0658 779 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 24 45 663 - -
Aev06g0658 779 Gene3D - 194 438 IPR027417 -
Aev06g0658 779 Gene3D - 439 615 IPR027417 -
Aev06g0658 779 CDD DEADc_DDX42 242 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0658 Aev-Chr6 4500923 4504233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0658 228 581 Eukaryotic Initiation Factors Gene Family AT3G19760 32.203 6.53e-61 209