Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0642 ATGCTCATAAAACCTATGAGTTCATCCTCAACTAATTTAGCAAGACTCATGAATTCAACTCTCAGAAATAGTGACCTCTCATTCTCTGATATTGAGACAAAGGTGGCTCCAGTATTATTTCAAGCATTTAAGACAGTTCCTCACTTATCTCAAATATCATACATTGGTATAAAAGGTTTATTTTTCTCATTCTACACTTATGATGATAAAGTTATGGCATTATACTCAAACTCAACATCTTCTAATTGGGGTGCCTCAAAAGCAATTCAATACTATAGCCAACATGTAAATCATGACAATGGAGAATTATATGGTGATGCCACAATATTTGAGTCCTCTATAAATGCAAGTTGGGTTGGTGAAATACTGAATAGTTCAAAAGGGTATGCCTCATTGGGAACCAAGTGGAACAATGATCATGATCTTCTGTTCTTTAGTTCAGCTAAAATCACAGCAAGAGAAGTGATATCTCTTGGGTTTGGTGCAAAACCTATAACTGATTTTTTCAGTAACATTGGTCAACAAGGTGCAATTTTGTATTTGGCTACCAAAGATGGACAAGTGCTTGTAGAAGGGGTCAAACATACTCGTATGGTCTTTTCTAATGATGATATGGTTTCATTACAATCTATGAATGGTGATCAAATTAATTATGAGGGTTCTGTTTCATGCAAAGATGGAGTTGTGGCTTCTAATTTGAGAATTCAGGGTGTTGACTATTTAATGCATTGCTCCTCCATTGATATAATGGGAATAGAATCGGTGTATGTTGTGGCTGTCCCAAGTTATGGAGGGGTCAAGTTTCCTTTCAAGTGTAAAAGAATTGACTTGATCCTATTGATTACAATGCTGGTCACAATGGCCATTGTCACAATAAGCTTGCTATTTACAAATGCAGAGATTAGCAGAGCCTCTAGGAGGCAAAAGGAAGCCACTGAACAAGCTGAGCAGAAGAATATGAATAAGAGCATTGCTTTTGACACTGCAAGTCATGACATTAGAAATTTGCTCACAGGTCTTAGTGGTTTGATAGACATGTCCTATCAGCATGTTGTCCCTAGTTCAGAACTAGAGACCAACTTGAAACAAATGGACTCTGGAATCCTGGATTCTATACTTGATATAAGCAAAATTGAGGCAGGGAAAATGGAGCTTGAAGAGGAGGAATTTGATGTGTTCCAACTGTTGGAAGATGTGGTTGATTGGTACCATCCAAAGGCTTTGAAGAAAGGATTAGATATTGTGTTAGACTCTTGCAATGGCTCTATACTAAGATACTCACACAGCAAGGGTGACAGAGTAAAACTGAAGAGAATATTGTGCAACTTATTGAACAATGCTATCAAATTCACTGATGCAGGACACATAGTTATTCGGGCTTGGACTCAGAAGCCAACATTGCAGAACTCAATGGTTGCTTCTAATCAATCATGCAACTTCAAGACTCATTGGTCATGTTTGTTTTCTAGGAAGAATGAAGCACTTGGTGACATTGAATCCACCTCAAAGAATTCGACTCGAACAGATTCTGGTCAGATGAGTTTCACATTTGAAGTGGATGATACAGGGAAAGGAATTCCTAAGGACAAGCATGAGTCTGTGTTTGAGAATTATGTGCAAGTCAAAGAAAATGCTCTTGGTCATGGTGGAACTGGCTTAGGACTTGGCATTGTTAAGTCATTGGTACATTTGATGCATGGGAATATTGGAATTGTGGACAAGGATGTTGGTGAAAAAGGAACTTGTTTCAGGTTCAGTGTGCTCCTCACTGTATGTGAAACAATATCAGGTGATTCTGGATCAGGTGACAGAAACCAATCTCAGGGACCAATCATTCATACTACAAGTTCTGGTTCAAGTATGTGTTCGTCGAGTCCCCGGTTAACCATTTGCAGTCCTAGTCCTACTAGACCCGAGGCGCATTCTCGAGTTGTTCTTTTGGTTCAAGACGAGGAGCGCCGACGAACTACACAAAGGTTCATGGAGAGCTTAGGGATCAAAGTTAAGGTTGTGAAGCAGTGGACACAGTTATCTAGTACCCTCAATAATATTAGGGGCCACAGTTCCAATAGTAATAGCTTGAGATCTCCAGGGTCTTCTTCACATAGTTGGAATGCCAAATTCAAATGTGTCCCTTTGAGTTCCATGGATGGAAATGAGTATGTAAATTCAATCTTCAAGAAGACAAGAGCTGAAGCTAACACCTTGGGATTTGTCCTAATTGTGGTTGATGTAAAAGAAGGACAATTTGGAGAACTTTGCAGTGTGGTATACGAGTTCAAGAGAGACCTTGGCTTTCCTTGCAGGGTTGTTTGGTTAGACAATCCACTTAGGCCTAATGTTAATGAGAATGCTTGCGATTCAGACGACATTGTCATGCGAAAACCATTTCATGGTAGTCGTTTGTTCCAAGTTGTGAGGCTTCTTCCTGAGTATGGTGAATGCAGTTCAAGTAGAGGACAGAGAGAAAGTGGTTCAAGAGTTTCCCCAAGTGATGAACAAGAAAAGTATGGTGGCAGTTTAAGGTCTAAATCAAGAACAAGTTCATCAGTTGGAGAGTCAAGCAATGAGAAGCCCTTGAGTGGAAAGAGAATTTTGGTTGTTGAGGATAATGAAATTGTGAGAAGGATTACTACAGCTAAATTGGAACGTCTTGGTGCCTCTGTAGAGAAATGTGAGAATGGTCAACAAGCTGTGCAGCTAGTTCAAGAAGGTCTAACTAGATATAATCCCAATCCTCCATATGATTACATCTTAATGGACTGCGAGATGCCGGTGATGGACGGATTTGAGGCAACAGAGCGGATAAGGGAGATGGAGAAGAAGCATTTTGTTCGCATTCCTATCATTGCATTAACTGCTTATACTGTGGAAGAGGCCAAAAGGACCGTAGAGGCCGGAATGGACCATCACTTAGACAAATCCTTCGAAGCAGAGCATTTACTCAAAGCCATCACAAACATACAACGCAGTAGATAG 2979 0.3995 MLIKPMSSSSTNLARLMNSTLRNSDLSFSDIETKVAPVLFQAFKTVPHLSQISYIGIKGLFFSFYTYDDKVMALYSNSTSSNWGASKAIQYYSQHVNHDNGELYGDATIFESSINASWVGEILNSSKGYASLGTKWNNDHDLLFFSSAKITAREVISLGFGAKPITDFFSNIGQQGAILYLATKDGQVLVEGVKHTRMVFSNDDMVSLQSMNGDQINYEGSVSCKDGVVASNLRIQGVDYLMHCSSIDIMGIESVYVVAVPSYGGVKFPFKCKRIDLILLITMLVTMAIVTISLLFTNAEISRASRRQKEATEQAEQKNMNKSIAFDTASHDIRNLLTGLSGLIDMSYQHVVPSSELETNLKQMDSGILDSILDISKIEAGKMELEEEEFDVFQLLEDVVDWYHPKALKKGLDIVLDSCNGSILRYSHSKGDRVKLKRILCNLLNNAIKFTDAGHIVIRAWTQKPTLQNSMVASNQSCNFKTHWSCLFSRKNEALGDIESTSKNSTRTDSGQMSFTFEVDDTGKGIPKDKHESVFENYVQVKENALGHGGTGLGLGIVKSLVHLMHGNIGIVDKDVGEKGTCFRFSVLLTVCETISGDSGSGDRNQSQGPIIHTTSSGSSMCSSSPRLTICSPSPTRPEAHSRVVLLVQDEERRRTTQRFMESLGIKVKVVKQWTQLSSTLNNIRGHSSNSNSLRSPGSSSHSWNAKFKCVPLSSMDGNEYVNSIFKKTRAEANTLGFVLIVVDVKEGQFGELCSVVYEFKRDLGFPCRVVWLDNPLRPNVNENACDSDDIVMRKPFHGSRLFQVVRLLPEYGECSSSRGQRESGSRVSPSDEQEKYGGSLRSKSRTSSSVGESSNEKPLSGKRILVVEDNEIVRRITTAKLERLGASVEKCENGQQAVQLVQEGLTRYNPNPPYDYILMDCEMPVMDGFEATERIREMEKKHFVRIPIIALTAYTVEEAKRTVEAGMDHHLDKSFEAEHLLKAITNIQRSR* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0642 992 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 589 IPR003594 -
Aev06g0642 992 CDD HisKA 328 377 IPR003661 GO:0000155|GO:0007165
Aev06g0642 992 ProSiteProfiles Histidine kinase domain profile. 328 591 IPR005467 -
Aev06g0642 992 PANTHER HISTIDINE KINASE CKI1-LIKE 2 987 - -
Aev06g0642 992 PANTHER TWO-COMPONENT HISTIDINE KINASE 2 987 - -
Aev06g0642 992 CDD REC_hyHK_CKI1_RcsC-like 865 985 - -
Aev06g0642 992 MobiDBLite consensus disorder prediction 598 637 - -
Aev06g0642 992 Gene3D - 841 991 - -
Aev06g0642 992 SMART REC_2 863 985 IPR001789 GO:0000160
Aev06g0642 992 MobiDBLite consensus disorder prediction 598 636 - -
Aev06g0642 992 Pfam Response regulator receiver domain 865 985 IPR001789 GO:0000160
Aev06g0642 992 MobiDBLite consensus disorder prediction 815 860 - -
Aev06g0642 992 SUPERFAMILY CheY-like 861 990 IPR011006 -
Aev06g0642 992 PRINTS Bacterial sensor protein C-terminal signature 515 529 IPR004358 GO:0016310|GO:0016772
Aev06g0642 992 PRINTS Bacterial sensor protein C-terminal signature 549 567 IPR004358 GO:0016310|GO:0016772
Aev06g0642 992 PRINTS Bacterial sensor protein C-terminal signature 533 543 IPR004358 GO:0016310|GO:0016772
Aev06g0642 992 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 370 587 IPR036890 -
Aev06g0642 992 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 308 383 IPR036097 GO:0000155|GO:0007165
Aev06g0642 992 Coils Coil 301 321 - -
Aev06g0642 992 ProSiteProfiles Response regulatory domain profile. 864 989 IPR001789 GO:0000160
Aev06g0642 992 MobiDBLite consensus disorder prediction 817 833 - -
Aev06g0642 992 Gene3D - 294 379 - -
Aev06g0642 992 Gene3D - 380 596 IPR036890 -
Aev06g0642 992 SMART HKATPase_4 431 591 IPR003594 -
Aev06g0642 992 MobiDBLite consensus disorder prediction 841 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0642 Aev-Chr6 4419392 4423365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0642 9 992 Histidine Kinase Gene Family AT2G47430 37.488 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev06g0642 HATPase_c 2.6e-23 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0642 - - gmx:100790376 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0642 06 4419392 4423365 Aev06g0642 06 4419392 4423365 ECH