Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0640 ATGGAAGAGGTAGTCTTGCTTGTCGATGACTTGAAATCGCTTTCTGGGATTCATCGCTGTAGAATTTGTCATGAAGAAGAGTTCGAGAACCCAACAAGCTTGGAAGCACCTTGTGCTTGTTCTGGAACCGTTAAGTTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAGAAAGGAAACATAATTTGCGAAATATGTCTCCAGCAATATGAACCTGGATATACAGCTCATCCTAAGAAGTCTAAGATAAATGATGAAGCAATGTCCGCAAGGACGGAGCAAGAAGCGTCAAGTGGAAGAATAAATGCAGCGGCGGAAGATGAAGAAGAAGAAGGAGGAGAAGGAGATTACAACTCTGAATGCAGCTCTGCAGCTGACAGAAGCGCGTCTTGCTGTCGATCACTAGCATTAGCTTTTACATTTGTCTTGCTTGTAAGACATCTTTTCGCAGTGATTATAAATGGAACGGAACATTATCCATTTACACTTTTAACAGTGATTATACTAAAAGCTAGCGGGATTATTATACCAATGTACATAATTATTAGGACCATCGCAGCCATTCAGAACAGTATTCATCAACACTACGAGGATTATGACTACGCCAGATCATTGTCCAATGGAAATGAAGAAAACCAGTCACGGCTTGATGCATATGCAAGACATATATAG 675 0.4089 MEEVVLLVDDLKSLSGIHRCRICHEEEFENPTSLEAPCACSGTVKFAHRDCIQRWCNEKGNIICEICLQQYEPGYTAHPKKSKINDEAMSARTEQEASSGRINAAAEDEEEEGGEGDYNSECSSAADRSASCCRSLALAFTFVLLVRHLFAVIINGTEHYPFTLLTVIILKASGIIIPMYIIIRTIAAIQNSIHQHYEDYDYARSLSNGNEENQSRLDAYARHI* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0640 224 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 78 IPR013083 -
Aev06g0640 224 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 1 210 - -
Aev06g0640 224 ProSiteProfiles Zinc finger RING-CH-type profile. 12 74 IPR011016 GO:0008270
Aev06g0640 224 CDD RING_CH-C4HC3_MARCH 20 67 - -
Aev06g0640 224 SMART ringv_2 19 68 IPR011016 GO:0008270
Aev06g0640 224 Pfam RING-variant domain 20 67 IPR011016 GO:0008270
Aev06g0640 224 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 210 IPR033275 -
Aev06g0640 224 Pfam Protein of unknown function (DUF3675) 73 186 IPR022143 -
Aev06g0640 224 MobiDBLite consensus disorder prediction 89 120 - -
Aev06g0640 224 SUPERFAMILY RING/U-box 18 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0640 Aev-Chr6 4403044 4405384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0640 20 67 C3H Transcription Factor Family AT5G05830 38.462 6.69e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0640 - - gmx:100802379 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0640 06 4403044 4405384 Aev06g0640 06 4403044 4405384 ECH