Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0627 ATGGATGTTCAAGTTCAAGCACTAGCAGAGAAAAGCTGTAACGATTGCCACACAACCACCACCCCCTTATGGAGGGCTGGTCCAGATGGGCCAAGGTCTCTCTGCAATGCATGTGGGCTAAGATACAGAAAAAGGAGGAGAGCTATGCTAGGAATGGATAAAGGGGGAGCAAAGAAAACCAAGAAGAGGAGCAGAACAAGAAGGGGCAATGAAGTTGGGGTTCCATTGAATAAGGGAGTGATTGATTTTGGTAGAAACATGGAGCCCTATGTGTTACATGGAAGGCAATGCAATTTGAAAGAGGAAGAAGAAGCAGCTATATTGTTGATGGCTCTTTCTTGCGGTTCTGTTTGTGCTTATTAG 363 0.4518 MDVQVQALAEKSCNDCHTTTTPLWRAGPDGPRSLCNACGLRYRKRRRAMLGMDKGGAKKTKKRSRTRRGNEVGVPLNKGVIDFGRNMEPYVLHGRQCNLKEEEEAAILLMALSCGSVCAY* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0627 120 ProSitePatterns GATA-type zinc finger domain. 13 38 IPR000679 GO:0006355|GO:0043565
Aev06g0627 120 ProSiteProfiles GATA-type zinc finger domain profile. 7 43 IPR000679 GO:0006355|GO:0043565
Aev06g0627 120 Pfam GATA zinc finger 13 47 IPR000679 GO:0006355|GO:0043565
Aev06g0627 120 SMART GATA_3 7 69 IPR000679 GO:0006355|GO:0043565
Aev06g0627 120 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 10 47 - -
Aev06g0627 120 CDD ZnF_GATA 12 63 IPR000679 GO:0006355|GO:0043565
Aev06g0627 120 Gene3D - 9 71 IPR013088 GO:0006355|GO:0008270
Aev06g0627 120 MobiDBLite consensus disorder prediction 51 73 - -
Aev06g0627 120 PANTHER OS01G0976800 PROTEIN 8 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0627 Aev-Chr6 4324780 4325259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0627 10 119 C2C2-Gata Transcription Factor Family AT5G49300 47.788 2.88e-26 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev06g0627 GATA 5.7e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0627 - - adu:107492427 137.117