Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0613 ATGGTGTCTCTGAAACTCCAGAAGCGGCTCGCAGCTAGCGTCCTCAAGTGTGGGAGAGGCAAGGTCTGGCTTGACCCCAATGAAGTCAACGAAATCTCCATGGCCAATTCTCGCCAAAACATTCGGAAGCTGGTTAAGGATGGTTTTATTATCAGGAAACCCACCAAGATTCATTCCCGCTCACGTGCCCGTCGAATGAAGGAAGCCAAGAGGAAAGGGCGTCACTCTGGATATGGTAAGCGTAAGGGTACCAGGGAGGCAAGGCTTCCCACCAAAATTCTTTGGATGAGGAGAATGCGTGTCCTCAGGCGCTTGCTCCGAAAGTACAGAGAATCCAAGAAGATTGACAAGCACATGTACCATGACATGTACATGAAGGTCAAGGGTAATGTTTTTAAGAACAAGAGAGTGCTAATGGAGAGCATTCACAAGTCCAAGGCTGAGAAGGCTAGAGAAAAGACCTTGTCTGACCAGTTTGAGGCCAAACGTGCCAAGAACAAGGCCAGCAGAGAAAGGAAAATTGCTCGCAGGGAGGAGCGCCTTGCTCAGGGTCCTGGTGGGAAGCCATCCCCTGCGCCCAATGCAGCAACTGCTACAGCATCACAGCCTGCCCAAGCACCAAAGAAATCCAAGAAGTGA 639 0.5055 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERLAQGPGGKPSPAPNAATATASQPAQAPKKSKK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0613 212 PANTHER 60S RIBOSOMAL PROTEIN L19 1 212 IPR039547 GO:0003723|GO:0003735|GO:0022625
Aev06g0613 212 MobiDBLite consensus disorder prediction 144 212 - -
Aev06g0613 212 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Aev06g0613 212 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Aev06g0613 212 MobiDBLite consensus disorder prediction 144 183 - -
Aev06g0613 212 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Aev06g0613 212 MobiDBLite consensus disorder prediction 57 79 - -
Aev06g0613 212 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Aev06g0613 212 MobiDBLite consensus disorder prediction 194 212 - -
Aev06g0613 212 PANTHER RIBOSOMAL PROTEIN L19 1 212 - -
Aev06g0613 212 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Aev06g0613 212 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Aev06g0613 212 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Aev06g0613 212 MobiDBLite consensus disorder prediction 57 85 - -
Aev06g0613 212 Gene3D - 57 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0613 Aev-Chr6 4239785 4241492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0613 1 212 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 84.906 2.95e-128 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0613 K02885 - gmx:100527501 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0613 06 4239785 4241492 Aev06g0613 06 4239785 4241492 ECH