Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0612 ATGTGTGGCGGTGCCATAATCGCAGAGTTCATCCCTCGCAACCGCTCTCGCCGCCTTACGGCCTCTGAAATCTGGCCCAACACATTCGGCAAACACACCAATGACGACACTGACTTGGATGATTTCTCTACTCTCCAGCAACCAATACTTCCTCTCAAAACATCCCCACCAGTTCGTGAGCAAGTTGAGAAGCCCGCGAAGAGGCAGAGGAAGAACCTGTACAGAGGGATAAGGCAGCGTCCATGGGGAAAATGGGCTGCAGAGATTCGCGATCCGAGAAAAGGGGTTCGCGTTTGGCTCGGAACCTTCAACACTGCTGAAGAAGCTGCTAGAGCTTACGACAGAGAAGCTCGAAAGATCCGTGGGAAGAAAGCAAAAGTGAATTTCCCAAACGAAGACGATGCGTACTCCATGGAAGCTCGTGCTAGTAATCATACCCCACCCCCTGTTCCACTTGGGCGACAGAGCAATGATCATTCTCCGCTCTATCAGCAGCAATACGTTGCTTGCAGCAACAACTTGAACCCGAAGAGCCTGAACTTGGAGTTTGGTTATGATCTGAACCAAACAGGGGCGATGAACACCCCTGTTCATGGTGGTATCAATACTGACCCATTTGTTGGTTGTGTTGATGAGAGTTCTGAGTATGGATCTGGGTCGGGCTCAGAGGGTGGTTACCTGGCAACAGAATTGGTAGGATCGAATGCCTCCCATCATCATTTCGGTGATGAGAAGGTGAATGGTGAAGAACAGGTGAAGCGTGAAACAGAGTCTCAAAATAATAATAATAATAATGAAGAGGGAAATAAGAGCAGAAATTATGAAGTAGAGAAGCTTTCGGAGGAGCTGATGGCGTATGAGAACTACATGAGGTTTTATCAGATTCCATTCTACGATGGCCAATCTGCTGCAACCAACAACAACAATGTTCAGGAGAGTGTGGTTGCGGAACTCTGGAGCTTTGATGAATGA 972 0.4825 MCGGAIIAEFIPRNRSRRLTASEIWPNTFGKHTNDDTDLDDFSTLQQPILPLKTSPPVREQVEKPAKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDAYSMEARASNHTPPPVPLGRQSNDHSPLYQQQYVACSNNLNPKSLNLEFGYDLNQTGAMNTPVHGGINTDPFVGCVDESSEYGSGSGSEGGYLATELVGSNASHHHFGDEKVNGEEQVKRETESQNNNNNNEEGNKSRNYEVEKLSEELMAYENYMRFYQIPFYDGQSAATNNNNVQESVVAELWSFDE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0612 323 Pfam AP2 domain 74 122 IPR001471 GO:0003700|GO:0006355
Aev06g0612 323 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Aev06g0612 323 MobiDBLite consensus disorder prediction 238 256 - -
Aev06g0612 323 CDD AP2 74 131 IPR001471 GO:0003700|GO:0006355
Aev06g0612 323 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Aev06g0612 323 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Aev06g0612 323 MobiDBLite consensus disorder prediction 238 274 - -
Aev06g0612 323 Gene3D AP2/ERF domain 73 131 IPR036955 GO:0003700|GO:0006355
Aev06g0612 323 PANTHER DNA-BINDING DOMAIN 1 302 IPR044808 GO:0003700|GO:0009873
Aev06g0612 323 PANTHER EREBP TRANSCRIPTION FACTOR 1 302 - -
Aev06g0612 323 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
Aev06g0612 323 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0612 Aev-Chr6 4236028 4237072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0612 1 189 AP2-EREBP Transcription Factor Family AT3G16770 44.928 3.63e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev06g0612 AP2 9.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0612 K09286 - gmx:100780763 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0612 06 4236028 4237072 Aev06g0612 06 4236028 4237072 ECH