Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0601 ATGAAGCAATTCTTCTCAGTGTTGGCGATCTGCGTGATCGTTATGGCACACCAAACAATAATTGGCGCAGAGCAACTCCCGACGGGAGAGGCTCTGATCAAGAAAGTGTGCCAAGAATCAGAGACGAAGAACCTCTGCCTCAAGGTTCTTTTCTCCGATCCATCAAAGATCGAAACCGCCACCGCCAAGGACTTGGCAATCATCTCTCTCCGAGTGGCCGCCACCAACGCCTCCAGCATCGTGGGCGACGTGAAGAGGCTCATCGATAACGCCGAACAACTCGAGCCCGAGATCCAACAGGGGCTGGCAGATTGCAAGGAGACAATCTTGGACGCAGAGGCGCAGCTGGAGGACACCATCGCTGCACTGTTGGTGGATGACGACAGCGATGCTAACCTGTGGCTTAAGGCCGCATTGTCTGCCATTGATACCTGCGATGCATCTATCCCTGGGAATGATGATATCCTCTCCGTTAGGAGCGCCTCGTTCCGCAAGCTCTGCAACATCGTCGTCCTCATCACCACCAGGTTAATCTTGCAGGATCAACATGTTTATTAA 558 0.5305 MKQFFSVLAICVIVMAHQTIIGAEQLPTGEALIKKVCQESETKNLCLKVLFSDPSKIETATAKDLAIISLRVAATNASSIVGDVKRLIDNAEQLEPEIQQGLADCKETILDAEAQLEDTIAALLVDDDSDANLWLKAALSAIDTCDASIPGNDDILSVRSASFRKLCNIVVLITTRLILQDQHVY* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0601 185 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 178 IPR035513 -
Aev06g0601 185 PANTHER PECTINESTERASE 3 177 - -
Aev06g0601 185 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 177 IPR035513 -
Aev06g0601 185 Pfam Plant invertase/pectin methylesterase inhibitor 32 170 IPR006501 GO:0004857
Aev06g0601 185 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 3 177 - -
Aev06g0601 185 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 176 IPR006501 GO:0004857
Aev06g0601 185 SMART PMEI_2 28 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0601 Aev-Chr6 4173246 4173803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0601 27 164 Carbohydrate Esterase AT3G14310 23.288 3.06e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0601 - - gmx:102667060 210.69