Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0600 ATGGCCTTGGACCCAGACATTGAAGCAAAGTATGTACATAACGGCAAGGTCATGCTAGGCTCTGCCATTCTTCTCTTCATACTAATTCTTATCATCATTTTCTATCGCACTTACGCCCATATATGCATCCGCCGCCGCCGCCGCCACCTCTTCCCTAACTCACTTTCCACCGCCACTTCCTCTGCCGCCGCTACTTTCAACGAACGCCTTGACCCTTCCCTTCTGAAGTCTCTTCCTACCTTTACTTTCTCCTCCGCCGTACACCGCCCTCTTCAGGACTGCGCCGTCTGCCTGTCGGAGTTCGAAGACGGCGAAAAGGGCCGCGTTCTCCCCAACTGCGGCCACGCTTTCCACAGCAGTTGCATCGACATGTGGTTCGGTTCTCACTCTAACTGTCCTATGTGCCGTGCAAAAGTCCAGCCTGCCACGTCATCACAAACGGTTGAAGCGTGCTCTGTTTCTGTTACGGAAACGGTTGAGGTGGAGGTTGGTGGTTGCTCGTCTCTTCCTCCGCCGGTTATGTGCCCCAGAAAGCCGTTGAGTGTAACCGTGGAGCTGCCCGGAGAGGACAGAAATAATTTGGATCATCGGATTCTGTCGCTGAAGAGATTTTGCAGTGTCTAG 624 0.5337 MALDPDIEAKYVHNGKVMLGSAILLFILILIIIFYRTYAHICIRRRRRHLFPNSLSTATSSAAATFNERLDPSLLKSLPTFTFSSAVHRPLQDCAVCLSEFEDGEKGRVLPNCGHAFHSSCIDMWFGSHSNCPMCRAKVQPATSSQTVEACSVSVTETVEVEVGGCSSLPPPVMCPRKPLSVTVELPGEDRNNLDHRILSLKRFCSV* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0600 207 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 9 161 - -
Aev06g0600 207 Pfam Ring finger domain 93 136 IPR001841 -
Aev06g0600 207 CDD RING-H2_EL5_like 93 136 - -
Aev06g0600 207 SMART ring_2 94 135 IPR001841 -
Aev06g0600 207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 143 IPR013083 -
Aev06g0600 207 ProSiteProfiles Zinc finger RING-type profile. 94 136 IPR001841 -
Aev06g0600 207 SUPERFAMILY RING/U-box 74 146 - -
Aev06g0600 207 PANTHER RING-H2 FINGER PROTEIN ATL64 9 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0600 Aev-Chr6 4171299 4171922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0600 11 140 Rapid Response to Elicitors AT3G16720 45.139 9.22e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0600 - - gmx:102665377 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0600 06 4171299 4171922 Aev06g0600 06 4171299 4171922 ECH