Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0583 ATGAAATTCTGCAAGAAATACCAAGAGTACATGCAAGGCCAGGAGAAGCAGCTTCCTGGTGTTGGATTCAAGAAGCTCAAGAAGATCTTGAAGAAGTGCAGAAGAACTTGTCAATCCCAGAAACCCCTTAATGGATCCCTTCCTCTCAAAACCTGCCCTGATCATTGCCCAGTGTGCGATGGGACGTTCTTCCCTTCCCTGCTCAGTGAAATGTCAGCTATAGTAGGATGCTTCAACCAGCGTGCACAGAAATTGCTGGAGCTACACCTTGCTTCTGGCTTCAGAAAGTACTTGTTCTGGTTCAAAGGCAAAACAAAAGGGAACCACACTGCTCTTATTCAAGAAGGCAAGGATCTTGTCACTTATGCACTCATAAATGCCATTGCAATCAGAAAAATACTCAAGAAATATGATAAGATTCATTATTCCAAGCAAGGGCAATTGTTCAAGTCACAGGTTCAGAGTATGCACAAGGAAATTCTGCAGAGTCCATGGCTTTGTGAGCTTATGGCCTTCCACATCAATTTGAGGGAAACCAAGGTGAAGTCAAGGAAGGCGGTGGCACCGGCTTTCTTTGAAGGATGTTCTCTGACATTCAAGGATGGGAAGCCAACACTTACTTGTGAGCTCTTTGATTCCATCAAAATTGATATTGACTTGACTTGTTCTATATGCTTGGACACAGTATTTGATCCAGTTTCTCTGACATGCGGCCATATATTCTGCTATATTTGTGCTAGCTCGGCTGCATCAGTATCTATTGTTGATGGACTAAAATCAGCAGATCCTAAAAAGAAATGTCCCTTATGCCGAGAGAGAGGAGTTTATGAAGGGGCTGTTCGTTTGGAAGAACTAAATATTCTGTTAGGCCGAAGCTGTCAGGAATACTGGGAGCAAAGGGTTCAGGAAGAGAGGGTAGAGAGGGTTAAGCAGATAAAGGAACACTGGGAATCACAGTGTAGAGCATTCATGGGCGTTTAA 981 0.4353 MKFCKKYQEYMQGQEKQLPGVGFKKLKKILKKCRRTCQSQKPLNGSLPLKTCPDHCPVCDGTFFPSLLSEMSAIVGCFNQRAQKLLELHLASGFRKYLFWFKGKTKGNHTALIQEGKDLVTYALINAIAIRKILKKYDKIHYSKQGQLFKSQVQSMHKEILQSPWLCELMAFHINLRETKVKSRKAVAPAFFEGCSLTFKDGKPTLTCELFDSIKIDIDLTCSICLDTVFDPVSLTCGHIFCYICASSAASVSIVDGLKSADPKKKCPLCRERGVYEGAVRLEELNILLGRSCQEYWEQRVQEERVERVKQIKEHWESQCRAFMGV* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0583 326 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 326 IPR033326 -
Aev06g0583 326 ProSiteProfiles Zinc finger RING-type profile. 222 271 IPR001841 -
Aev06g0583 326 CDD SPX_BAH1-like 2 147 - -
Aev06g0583 326 ProSiteProfiles SPX domain profile. 1 151 IPR004331 -
Aev06g0583 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 209 324 IPR013083 -
Aev06g0583 326 SMART ring_2 222 270 IPR001841 -
Aev06g0583 326 ProSitePatterns Zinc finger RING-type signature. 237 246 IPR017907 -
Aev06g0583 326 Pfam Zinc finger, C3HC4 type (RING finger) 219 272 - -
Aev06g0583 326 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 326 - -
Aev06g0583 326 SUPERFAMILY RING/U-box 215 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0583 Aev-Chr6 4078645 4080663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0583 219 271 C3H Transcription Factor Family AT4G28270 41.379 5.27e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0583 K16275 - gmx:100797432 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0583 06 4078645 4080663 Aev06g0583 06 4078645 4080663 ECH
Aev02g0537 02 4105694 4108513 Aev06g0583 06 4078645 4080663 PCT