Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0578 ATGGTGGAAATAAGACCCACCTTTTCCCCCTCCTCCTCCTCTTCTTCTTCTTCTTCATCAAAGCGAACCATTTCCCCCCCTTCTCCACCAACAGGCAAACGATCCAAGGTAACCAAAGAGGCCACGTCAGCAAGCCTTTCCCCCGAGGAGTTGAAGATAGTTGCGGAAATTTGTGATGCTTGGAAGCCTCCTTCTTTGTCCGTTGAAGACCAAGATATGATGTCGCCGGAATCTTTTGGCGCCAAAAAAGAAGAAAAAGAAGAGAATGCCACGGCGGCGCTTCCTTGCTCAAACGTGACGGATGCTTGGGGGATGCTCATTTCTCAGTATTCGGAGAATCCTAACCGGTTCATGTATGATCCTGTCTTCACTGTTGGTCGAGATTGTCGGTGTCATTTATGGATTGATGATCCAGATGTTAGTGACGTGTTGTGCCAGTTGAGCCTCGGAGAGCATGCAGGTTCACCTTGTGGATTACTGGAAATCAAAGGGAGTAAAGAAATTATTTTTGTTAATGGTCAGACTTGTTGGAAGGGTGCTGTGACTCATCTGACTTTAAATGGAGGCGATGAGGTGGTATTTTATGGCAACCATTCTTATATATTTCTGCCGCCTAATAAAATAAAAGACATCATGAAGAGAATATTACTTGACACACCTGCTAAAACTGGCAACAATGCTGTGAAGGATGGCACCAATAATAATGGATCTGCTAGCACTTCCAAAATAAAGGATCTTGATACCCAAACAACACAAGCATCAATTCTCAAACCTGATGATATTGATGTGTCTTTGGAAAGTTTCCCGTATTATCTAAGTGATACAACGAAGGATGTTTTGATTGCTTCTATGCATGTTCTTCTGAAATGCAATGGCTCTAGAGAATATGATGCAATCCTCCCCTCAATTTCCCCAATATTGTTATCTGGTCCTGAAGGTTCTGAAATATACCAGGAAACTTTGTCCAAGGCACTTGCTAAGCATTTCAGTGCCAGGCTACTAATTGTGGATTCTACTCTTTCACCTCCTGGTAGAACTACCCAGGCTGCCACATTACCACAGAGTATGTTTTCTAAGGGTGATCGAGTGAAATTCGTTGGCAAAGTTCCTTCTCCACCACCAGCAGATTATATTGCTAGAGGACCAATCTATGGGTACCAGGGCAAAGTTCTCCTTGCATTTGAAGATAATAGATCTGCAAAAGTTGGGGTTGTGTTTGATAAATCAATTCGAGATGGCAATAATCTTGGGGGCCTTTGTGACTGTGGTCATGGTTTCTTTTGTTCCGCTAATGATTTACAACGAGATAATTCTGGAAGGGATGGCTTTGACAAGACTGCAACTAGTGATATCTTTGAGGTTGTTTCTAAGGAGAGTGAAAAGGGTGCACTGGTGTTGTTCATTAAAGATGTTGAGAAGTTGAAGGTTTTTGGCTTGGAAAGTAAACTTCAGAGCTTACCACATAATGTTGTTGTAATTGGCTCACTTATCACTTCAGAGCCAACAGTGAAGACTCAGCAGCCTACTGGCATTCAGTTCAGAAAGCCGGGGACCAATCAGACAACCTTTCTGCCAGTAATTGATAGCCTGTTTTTCAGTAAACAGCTTGATAAGAGCAAAGAACGTCCCAAAGCGATGGAGCCACATAATCATCTTTTCCCAAATAAAGTGCCAATAATACTGCCTCAGGATGACGGTTTACTTTCTGAATGGAAGCAGCGGTTGGAACGTGACATAAAAACTATGAAACTTCATTCCAATACTCTCATCATTCGCTCAGTTATGAATGACCTTGGATTCAATTGCCCTAACCTTGAGGGACTCTGCATTAAAGATCAAGCCCTAAGAACCGAAAGTGTGAAAAAGATCATCAGCTGGGCTATAAGTCACCACCTTATGCATTCATCTGAAGGTGCTACAGAAGACTCTAAGCTTGTGCTATCTACAGAAAGCATTAACTATGGGCTGGAACTTCTACAGGGCATTGAAAATGCAAACAAGAACTTAAACAAATTGCAGAAGGAGGTGGTTACTGAGAATGAACATGAGAGAACACTGCTTGGTGATGTTTGTTCCCCAACTGATGTTGGAGTGACATTTGATGATATTGGAGCTTTAGAGGATGTGAAGAAGACCTTGAAGGAATTGGTCATGCTTCCGCTTCAGAGACCTGAGTTGTTTACCAAAGGACAGTTGACTAAGCCTCCCAAGGGAATATTGCTTTTCGGCCCCCCTGGAACGGGAAAGACGATGCTCGCAAAGGCAGTAGCAACTGAGGCTGGAGCAAGCTTTATCAACATTTCAATGTCCAGCATTTCTTCAATGTGGTTTGGCGAAGGAGAAAAATATGTCAAAGCTGTCTTTTCACTAGCCAGCAAGATTGCCCCATGTGTTATTTTTGTTGATGAGGTTGATAGTTTGTTAGGAAAACGTGATAATGCTCGTGAACCTGGGGCAGTGCATAGAATGAAGAACGAGTTCATGGTAAATTGGGATGGTTTGCGAACCAAAGAAAATGAGCGCGTGCTTGTTCTTGCTGCTACAAATAGGCCCTCTGATATTGAAGAGGCTGTTATCAGGAGGCTTCCACGAAGATTGATGATTGACTTGCCAGATGCTCCGAACAGAGTCAAAATTCTCAGGGTCATCTTAGCAAAAGAAGATTTGGCGCCTGATGTTGATTTGGAAGCAATAGCAAATATGACTGATGGATATTCCGGGAACGACCTAAAGAATCTATGCGTAGCGGCAGCTTATTGTCCAATTAGAGACATCTTGGAGAAAGAAAAGATTGAGGAGAGTTTAGCCGTGGCGGAGAACAGACCTTTTGAACGTTGCAGCGCTGCCGATATCCGTCCCATAAAGATGGCTGATTTCAAATATGCACAGCAACAGTCCTCTTTTCTGTTTTCATCACCAATATATATAATGGTTCGCCGATCGCCGCCACGGTCTCCGCCGCAGCCCAGCCCCATAGACGCCAAAATCTGGAGGGCCTGCGCCGGAGGCAGTGTTCGAACCCCGGAGCTGAACTCTACGGTTTACTACTTTCCTCAGGGGCACATGGAGCAGGCCTCTTCTCCACCGCGCAACCTCTCTCCTCACATCTTTCTGAGGCCATTCCTCCTCTGCCGCATAACCGCTGTGAGCTTCTTCGCCGATCCTGACACCGATGAGGTCTTCGCCAAGCTCATCCTCCACCCGATCACCATCACTCACCCGCTGCTTCAATCCTCTTCTGCCGGCGCTGACAGATTTAACGGCGAGGCTACGCCGGCTGCTGCTGGCGATGACGGCGATAAGATTGTATCTTTCGCCAAGACTCTGTCGCCGTCTGATGCCAACAACGGCAGCGGATTCTCCGTCCCGAGGCAATGTGCTGAGACGATATTCCCCCCGCTGAACTTCGAGGACAATCTGCCGGCGCAGAAGCTCTCCGTCACTGACGTCCATGGCGTCACATGGGAGTTTCGCCACATCTATACCGGGACTCCCGGGCGCCACCTGCTAACCACGGGATGGTTCAAGTTCGTCAACAGCAAGAGTCTCGTCTCCCATGACTCTGTCGTCTTCATGAAGGACTCCGGCGGGAAGATGTTCGTCGGGATACGCCGTTCGAGGAATTTAAACCTCTCCCTGAATGACGGCGACAGCGACAAGATGCCGGAGTGGCTGGCGGAGATCGTTGGGCTGGGGAACAACGTTGACGCCGAGGAGGCGAAGAAGAAGAAGAGTAACGAGGAGGTGGCGGCAGAGGAGTTCGGGAGGAAGAGGAGGGGGAGGCTGTCAGCGAAGGCGGTAGCGGAAGCGATGGAGCTGGCGGCGCAGAACAAGCCGTTCGAGGTGGTTTATTATCCAAGGATGGGGCAGCCGGAGTTTGTGGTGAGAGCGGAGGTAGTGGACGAATACATGAGCATGTGTTGGCGTCCAGGGATGAGGGTGAAGATGTCAAAGGAGAGTGAGGATTCGACAAGGGTGACATGGCATCTGGGTGCTGTGTCTGCTGTCTGCACCAATTTCGATCCTCAATGGCCACCTTCTCCTTGGCGCATGCTTCAGATGGCCTGGGATGAGCCTGAATCGTTGAAGAATGCCAAGTTGGTGAGCCCATGGGAGATCATACCTCTTTCCAGCACACCTCCAGTTCCAATTATTCATGAAGTAGTTCCACCGCCTCCGAACTTGTACTATTGTGTGACAGGGTTCTCTGATCATCCACCGACCATGGCACAAGTGAATCCATCACTCTTGAGTTATGGTATCATTTATCCTGCTGTTGGCATGCAGGGAGCCAGGCATGATCTACTTTCCGCACCTACTTTTCCCAACTTATCAAATAATAACAACTCTTTTCCTCATCATCCGTATATGGGCAACAACACAGCACAACCAAGGCCGAGTACTCCTCCATCAGAGGCCTTATCACCAGATAGCCAAGGTAGTATACTTTCCTCTGTCTCAGATTCTCCTGGAACACTGATGGTGAATAAAGCTGCTGGGTCTGGTTCAATTCGGCTATTTGGTGCAATCATTCAAGGAGAAAAGGCAGGTGATGAAGGTGGCCGCATGGATCCAGAAGTAAGAAATACTTGA 4593 0.4709 MVEIRPTFSPSSSSSSSSSSKRTISPPSPPTGKRSKVTKEATSASLSPEELKIVAEICDAWKPPSLSVEDQDMMSPESFGAKKEEKEENATAALPCSNVTDAWGMLISQYSENPNRFMYDPVFTVGRDCRCHLWIDDPDVSDVLCQLSLGEHAGSPCGLLEIKGSKEIIFVNGQTCWKGAVTHLTLNGGDEVVFYGNHSYIFLPPNKIKDIMKRILLDTPAKTGNNAVKDGTNNNGSASTSKIKDLDTQTTQASILKPDDIDVSLESFPYYLSDTTKDVLIASMHVLLKCNGSREYDAILPSISPILLSGPEGSEIYQETLSKALAKHFSARLLIVDSTLSPPGRTTQAATLPQSMFSKGDRVKFVGKVPSPPPADYIARGPIYGYQGKVLLAFEDNRSAKVGVVFDKSIRDGNNLGGLCDCGHGFFCSANDLQRDNSGRDGFDKTATSDIFEVVSKESEKGALVLFIKDVEKLKVFGLESKLQSLPHNVVVIGSLITSEPTVKTQQPTGIQFRKPGTNQTTFLPVIDSLFFSKQLDKSKERPKAMEPHNHLFPNKVPIILPQDDGLLSEWKQRLERDIKTMKLHSNTLIIRSVMNDLGFNCPNLEGLCIKDQALRTESVKKIISWAISHHLMHSSEGATEDSKLVLSTESINYGLELLQGIENANKNLNKLQKEVVTENEHERTLLGDVCSPTDVGVTFDDIGALEDVKKTLKELVMLPLQRPELFTKGQLTKPPKGILLFGPPGTGKTMLAKAVATEAGASFINISMSSISSMWFGEGEKYVKAVFSLASKIAPCVIFVDEVDSLLGKRDNAREPGAVHRMKNEFMVNWDGLRTKENERVLVLAATNRPSDIEEAVIRRLPRRLMIDLPDAPNRVKILRVILAKEDLAPDVDLEAIANMTDGYSGNDLKNLCVAAAYCPIRDILEKEKIEESLAVAENRPFERCSAADIRPIKMADFKYAQQQSSFLFSSPIYIMVRRSPPRSPPQPSPIDAKIWRACAGGSVRTPELNSTVYYFPQGHMEQASSPPRNLSPHIFLRPFLLCRITAVSFFADPDTDEVFAKLILHPITITHPLLQSSSAGADRFNGEATPAAAGDDGDKIVSFAKTLSPSDANNGSGFSVPRQCAETIFPPLNFEDNLPAQKLSVTDVHGVTWEFRHIYTGTPGRHLLTTGWFKFVNSKSLVSHDSVVFMKDSGGKMFVGIRRSRNLNLSLNDGDSDKMPEWLAEIVGLGNNVDAEEAKKKKSNEEVAAEEFGRKRRGRLSAKAVAEAMELAAQNKPFEVVYYPRMGQPEFVVRAEVVDEYMSMCWRPGMRVKMSKESEDSTRVTWHLGAVSAVCTNFDPQWPPSPWRMLQMAWDEPESLKNAKLVSPWEIIPLSSTPPVPIIHEVVPPPPNLYYCVTGFSDHPPTMAQVNPSLLSYGIIYPAVGMQGARHDLLSAPTFPNLSNNNNSFPHHPYMGNNTAQPRPSTPPSEALSPDSQGSILSSVSDSPGTLMVNKAAGSGSIRLFGAIIQGEKAGDEGGRMDPEVRNT* 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0578 1530 SMART B3_2 1105 1207 IPR003340 GO:0003677
Aev06g0578 1530 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 66 202 - -
Aev06g0578 1530 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 354 970 - -
Aev06g0578 1530 Pfam B3 DNA binding domain 1105 1206 IPR003340 GO:0003677
Aev06g0578 1530 Pfam Auxin response factor 1270 1353 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev06g0578 1530 Gene3D - 1102 1206 IPR015300 -
Aev06g0578 1530 MobiDBLite consensus disorder prediction 1 46 - -
Aev06g0578 1530 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 66 202 - -
Aev06g0578 1530 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 354 970 - -
Aev06g0578 1530 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 250 349 - -
Aev06g0578 1530 Pfam ATPase family associated with various cellular activities (AAA) 739 869 IPR003959 GO:0005524|GO:0016887
Aev06g0578 1530 Gene3D - 698 870 IPR027417 -
Aev06g0578 1530 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 250 349 - -
Aev06g0578 1530 SUPERFAMILY DNA-binding pseudobarrel domain 1100 1208 IPR015300 -
Aev06g0578 1530 MobiDBLite consensus disorder prediction 66 88 - -
Aev06g0578 1530 MobiDBLite consensus disorder prediction 224 244 - -
Aev06g0578 1530 Gene3D - 871 965 - -
Aev06g0578 1530 ProSiteProfiles B3 DNA-binding domain profile. 1105 1207 IPR003340 GO:0003677
Aev06g0578 1530 MobiDBLite consensus disorder prediction 1446 1490 - -
Aev06g0578 1530 Gene3D - 1308 1380 - -
Aev06g0578 1530 Coils Coil 655 682 - -
Aev06g0578 1530 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 698 968 IPR027417 -
Aev06g0578 1530 SMART AAA_5 735 872 IPR003593 -
Aev06g0578 1530 Pfam AAA+ lid domain 892 932 IPR041569 -
Aev06g0578 1530 MobiDBLite consensus disorder prediction 1 45 - -
Aev06g0578 1530 SUPERFAMILY SMAD/FHA domain 102 202 IPR008984 GO:0005515
Aev06g0578 1530 Gene3D - 93 207 - -
Aev06g0578 1530 CDD B3_DNA 1104 1205 IPR003340 GO:0003677
Aev06g0578 1530 CDD AAA 704 870 - -
Aev06g0578 1530 MobiDBLite consensus disorder prediction 225 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0578 Aev-Chr6 4047496 4057657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0578 992 1520 B3 DNA Binding Superfamily AT1G77850 43.292 1.43e-115 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev06g0578 AAA 1.9e-35 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0578 - - gmx:100800938 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0578 06 4047496 4057657 Aev06g0578 06 4047496 4057657 ECH