LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g0571	ATGGCGCCGAAGCAAAAGCGCCGTTCTCCTCTCAACGATCCTCCTCCCATCGAATCCGAGGAAGACCAAGAACCCTCTCATGAACAACAAGAAGCCGATGACGACGACGAAGGAGGAGGAGAAACAGCTTCTTCTGATGAACAAGAAGGAGACGACGAGCAAGAAAAACACCGCCTTTCACGCACCTTTCAACCTCCTCCCAGAAACCCTTCACTGTCCAAACCCCAATCCTCATCCTCCGAATCCGCCACTGAGTCAGATTCCGATTCAGAACCTGAAACCCCTACTCCCACACCTAACACCAAGGTCAAACCCTTAGCTTCCAAGCTCAAGGAGCAACCCCCAAAGGTGAAGCAGCAACAGTCATCCTCAGCAGCTACACAACCCAAGTCGGCGTCGAAGCGTCCTGCGGAGAACAACGGTCGCTCACCTGATCCGAAGCAGCCGAAGAAGAAGAAGGTAGAAGCTGCAGATGTTACGGCTTCGGACGACGAGGACGCGAAGAAATCGACCCGTGATGACTCCAAGAAGCTATTTCAGCGGGTATTTAGCGATCAAGATGAGATTGCTGTCCTCGAAGGCATGGTTGAGTTTCGATCTGCAATGGGAGGGGATGACCCCTACAAGTGTTCTGATGCTTTCCGTGATTTCATGATGAAGAGGTCGAAACGGCTCAGCTTCGACGCCTCCTCTGGCCAGTTAAAGGAGAAGATCCGGAGGCTGAAGACAAAGTTCAACAACAACGCTCGAAGGGGGAAGAATGGTGAGCCTCCTAAATTTTTGAAACCCCACGATCAGAGAGCCTTTGAGCTGTCGCAGGTGATTTGGGGCGAAGGTACCGCTGGAGGAGGAGGGGGAGTCATCAATGGAGATTTGGTAAAGACCAAGCCCAATGATGGGAAAGAGGGTAAGAAAATTACCAACCTCAAGAAGGAAATTATCAGTGAGAACGCGGAGAAGCTAAAGCCGAAACCCGAAGCCGCTAAAGCAAAACTGGATTCTGATTTGAACCTGATACCTGCAGATTCAAAGGAACTAGGAAATGTTGATGAGAGGACTGAGAAAATTGGGGGTTTAGGGTCATTGATTAGATATGACAAGGTTCTGGGTGAGTATGGACTGGGTGAGGATTTTCTGAGGAAGGGAGATGGGTTGATGGAAGCATCAAAAAGGGCAGATTTCGAGGGAAAGTGGGCGAAATTGGATGCTGCTGAATTGGAATTACGCGTGAAGCGAGCAGAACTATATGCGAGCCATGCTAAGTCGATGTTGCAATTGATTAAGTCGTCGAGAAATTAG	1299	0.4973	MAPKQKRRSPLNDPPPIESEEDQEPSHEQQEADDDDEGGGETASSDEQEGDDEQEKHRLSRTFQPPPRNPSLSKPQSSSSESATESDSDSEPETPTPTPNTKVKPLASKLKEQPPKVKQQQSSSAATQPKSASKRPAENNGRSPDPKQPKKKKVEAADVTASDDEDAKKSTRDDSKKLFQRVFSDQDEIAVLEGMVEFRSAMGGDDPYKCSDAFRDFMMKRSKRLSFDASSGQLKEKIRRLKTKFNNNARRGKNGEPPKFLKPHDQRAFELSQVIWGEGTAGGGGGVINGDLVKTKPNDGKEGKKITNLKKEIISENAEKLKPKPEAAKAKLDSDLNLIPADSKELGNVDERTEKIGGLGSLIRYDKVLGEYGLGEDFLRKGDGLMEASKRADFEGKWAKLDAAELELRVKRAELYASHAKSMLQLIKSSRN*	433

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev06g0571	432	PANTHER	BNAANNG10740D PROTEIN-RELATED	12	430	IPR007592	GO:0006355
	Aev06g0571	432	MobiDBLite	consensus disorder prediction	140	178	-	-
	Aev06g0571	432	MobiDBLite	consensus disorder prediction	73	103	-	-
	Aev06g0571	432	PANTHER	STOREKEEPER PROTEIN-LIKE	12	430	-	-
	Aev06g0571	432	Pfam	Protein of unknown function, DUF573	179	277	IPR007592	GO:0006355
	Aev06g0571	432	MobiDBLite	consensus disorder prediction	114	138	-	-
	Aev06g0571	432	MobiDBLite	consensus disorder prediction	1	178	-	-
	Aev06g0571	432	MobiDBLite	consensus disorder prediction	24	49	-	-
	Aev06g0571	432	MobiDBLite	consensus disorder prediction	242	264	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g0571	Aev-Chr6	4022702	4024000	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g0571	120	429	GeBP Transcription Factor Family	AT4G25210	32.919	4.25e-27	109

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GeBP	Aev06g0571		DUF573	5.2e-26	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g0571	-		-	gmx:100791520	233.417