Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0567 ATGGCAACAAATAGATTCGTGTGTGAGATATGCAACAAAGGGTTCCAGAGAGACCAAAACCTTCAACTACACCGAAGGGGACACAATCTGCCATGGAAGCTGAGGCAGAGGACAAGCACAGAGGTGAAGAAGAGGGTGTACGTGTGCCCTGAGCCATCATGTGTCCACCATAACCCGGCTCGTGCATTAGGAGACCTCACTGGGATCAAGAAGCATTATAGCCGCAAACATGGTGAGAAGAAGTGGAAATGTGACAAGTGCTCTAAGAGATATGCAGTTCAATCTGATTGGAAGGCACACCAGAAAACATGTGGTACTAGGGAGTATAAATGTGACTGTGGAACCATCTTTTCTAGGAGAGACAGTTTCATCACCCACAGAGCTTTCTGTGATGCACTAACTGAAGAAAACAACAGAATGAACCAAGGATTAACAAGTGGCATGCCACCAAACTTACAAAGCCAAATGCCAGATCTTATGTCCACTATGCCTCTAAGCAATAGTCCCAACACAGCACCACAAGAATTCAATGATCACTATAATGACCCAAACAAGAACTCACCCAAGCCCCTCCCACAAGAGCTAGTCCCAACACCATTCAAGTCCATGAGCATTGGTGGTGTTGGTCATGGAGTCATTTTCTCAAGCACTTCAGGTGCACTCTTTGGTGCCCCAATGAAAACCATGGCTCCCTCAAATTCCTCAAGCCTTCAACTCAGTACTTCAAATAATGGATCCCCTGGTTTACCAGGACTACTACTCTCTGCAGCAGGCTCAGCACACATGTCAGCAACAGCTTTGTTGCAGAAAGCAGCACAAATGGGTGCTACTGCAAGCAATAACAGCATTAACTCACCCATGATGCAAAAAAGCTTTTCTGCTACTACCATGGCTGGTCCTGATTCTGTTATTTCCCCTGCTACTACTATTAGACCACCATATTCTGGTACTATGATGCCACAGCAGCATAACCCTTCATATGATCATTTTCATCATGATCAATTACTTGCTGGAGTTAGTGGTGGTGGAGCATTCACCAACCATTTGTTTAAAGGACCACAAGAAATATCACAACTGTTTGATGCTAACAATGCAGGATCAACAATTAATGATCATATAGGAATGTTCAGCCAAATGTTCATGGGAACAGAACATAACCCTGGATTGATGAAGAGTGTGATGGAACAAGAGGTTAGTACTAGTGCTTCAAGTTTGATCCATGGAAGAGACAATAATGTAGCAGATCCAGGTGATAGTAATAACCCAATGGAGGCATCAAGGTTTGGAGGGAGTGACATGACAACTGTTCATGATTTCTTGGGGGTTGGGGGTTCAAATTCTTCAAGGGCACAGCAGAATTTGCATGATTCATCACAGCATCATCATCATCAACAAAGACTAGAAACATTGAGTCACCACCAGAGGATGCAAGTTATGAATCAACATCAATTTCATCATCACAATATTCCACATGGGGATTCAGCAACTATGGAGAAACATATGTGGGATGTTTGA 1515 0.4356 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSTEVKKRVYVCPEPSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALTEENNRMNQGLTSGMPPNLQSQMPDLMSTMPLSNSPNTAPQEFNDHYNDPNKNSPKPLPQELVPTPFKSMSIGGVGHGVIFSSTSGALFGAPMKTMAPSNSSSLQLSTSNNGSPGLPGLLLSAAGSAHMSATALLQKAAQMGATASNNSINSPMMQKSFSATTMAGPDSVISPATTIRPPYSGTMMPQQHNPSYDHFHHDQLLAGVSGGGAFTNHLFKGPQEISQLFDANNAGSTINDHIGMFSQMFMGTEHNPGLMKSVMEQEVSTSASSLIHGRDNNVADPGDSNNPMEASRFGGSDMTTVHDFLGVGGSNSSRAQQNLHDSSQHHHHQQRLETLSHHQRMQVMNQHQFHHHNIPHGDSATMEKHMWDV* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0567 504 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 1 473 - -
Aev06g0567 504 MobiDBLite consensus disorder prediction 166 188 - -
Aev06g0567 504 Pfam Zinc finger, C2H2 type 6 28 IPR013087 -
Aev06g0567 504 Gene3D Classic Zinc Finger 60 140 - -
Aev06g0567 504 MobiDBLite consensus disorder prediction 401 426 - -
Aev06g0567 504 SMART c2h2final6 47 77 IPR013087 -
Aev06g0567 504 SMART c2h2final6 6 28 IPR013087 -
Aev06g0567 504 SMART c2h2final6 82 102 IPR013087 -
Aev06g0567 504 MobiDBLite consensus disorder prediction 440 470 - -
Aev06g0567 504 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Aev06g0567 504 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
Aev06g0567 504 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 473 - -
Aev06g0567 504 MobiDBLite consensus disorder prediction 166 190 - -
Aev06g0567 504 SUPERFAMILY beta-beta-alpha zinc fingers 5 103 IPR036236 -
Aev06g0567 504 Gene3D Classic Zinc Finger 6 48 - -
Aev06g0567 504 MobiDBLite consensus disorder prediction 440 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0567 Aev-Chr6 3979091 3981053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0567 1 283 IDZ Gene Family AT3G50700 56.610 4.97e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev06g0567 zf-C2H2 0.0051 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0567 - - gmx:100782774 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0567 06 3979091 3981053 Aev06g0567 06 3979091 3981053 ECH