Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0562 ATGGTGGAGAGGAGAAAACCCCTCGTACTCTCTTCCACCAGACACCTCATCAGCTCCTTGTTGAACTCTTCCTCCGTAAGTGACAACCCTGCGACTACCAACACCCTTTTCCACCACCATGATTCCTCTTCCTCCTCCACCTTCCACTTACCTGCGGGGATTCTCAGATTATCCAGCAACCCAAATCACCATCATCCTCAATTCCCTTCTCTTGACGATTCTGCTCTCATTGGCCTTTCCACTACTCTTCTCAAAAGGCTCTCTGTCACTTCTGGCTCACTGGTTCTGGTGAAGAATGCTGAGATGGGTATGCAGAGAGTTGCTGTGGCCATTGCTCTTGATCCTCCAGGCACCACCGTCCCTGAGCTTGATTCTGATTCAAAGTTGTCTTGTTCTTCTTCTCAGTGTTCTAGAATGATGCTTGTGTTTCCTTCCTGTGATTTCCCTCCTAACGGGGCACTGTTGTTTGATCATGGAGTTGCTTATTTGTCTCCTCTTTTAGCATTTAATCTTAACTTGCACATGTCATGCTTGAAATCCATTCTACAACATGGGGAAGACACTTTGGCATCTTATTTCAAGCCTCAAGGGGGTGATGAAGATGCTGAAAAAAGCATTAAGGATTCTGTTATCAACATTGAGTTGGAACCTTTTGCTCAAGCTCCAAGGTTCGCCTCACATTTGAGGGTTTCCTTTGTGAAGTTGCCAGAATGTGGAGTCCTTGAATCTATTAGAGAAAGTTCACCTGTTGAATCCAAAGAACGGCAAGACATGATTGACTTGGCATTACAGAAGTACTTTGAAGTCGATAGATATTTGTCAAGAGGAGATGTTTTTGGGATTAACATAAATTGGAATTGCAATTCCACTATTTGCATTCCGTGCAACCAAAAATCACAAAAGAAAAATGACAACAACTTTATCTACTTCAAGGTCATTGCTATGGAACCATCAGATGAACCGGTTCTTCGTGTCAATAGAACCTTAACTGCTCTGGTGCTAGGAGGGAGTTCACCATCCGCCCTTCCCCCAAATTTATTAATTGCTGGGCCAGAAGGGCCTGTGCCCTTGCAAGGAGACACCGTAAAGATATTGGCTTCAATACTTACACCAACTTTCTGTCCATCGGCACTTTCTTCGAAGTTTAGAATTTCAGTTCTATTGTATGGCTTGGCAGGTTGTGGAAAGAGAACTGTTGTTAGATATGTTGCTCGTCGACTGGGCCTGCATGTAGTGGAATATAACTGTCATGATCTAATGAGATCTGAGAGAACATCTGTTACTCTAGCCCAAGCTTTCAAGACAGCTCAAAGATACTCACCAGCAATACTTCTTCTTCGCCATTTTGATGTTTTTCGAGACTCACCATCGCCTGAGGGTTCATTAAATGATCAAAGAGGCAATACATCTGAAGTTGCATCAGTTATCAGGAAATTCACTGAACCAGTTAGTGAACATGGTGATAACAACTCCCAGTGGAAATCAAATGGTGAATTTGTTGAGAAGAATGTTGAAAAGACAAGCTTGCATAAGGTCCTGTTGATTGCTGCTGCTGACAGTTCTGAAGGTCTACCTTCAACTATCAGACGCTGCTTTAGCCATGAAATAAGTATGGGGTCTTTGACTGAAGAGCAAAGGGCTGAAATGCTATCCCATTCACTGCAAAGTGTTTCCGGACTCCTCTCTAATACAGACTCAGAGGGTTTTGTTAAAGAAATAGTTGGACAGACATCTGGTTATATGCCCAGGGATATGTGTGCTTTAATTGCCGATGCTGGCGCCAACTTATTTCCCAGGAGCAATGCTGAAGTAGACAAAGATGGGCCTGAGGACGGAGATGGTTCAAAAGTGATGGAGAACAAGGACCAGAAAGTTTCACCTCAAATTCCTAGGAAAGAAGATTTGATGAAAGCTTTGGAACGATCAAAGAAAAGAAATGCATCAGCATTAGGCACTCCAAAGGTTCCAAATGTGAAATGGGAAGATGTTGGTGGGCTTGAAGATGTCAAAAAATCAATCCTGGATACTGTTCAGTTGCCTCTCCTGCACAAAGGTCTATTTTCATCTGGATTACGTAAGAGATCTGGTGTTCTTCTGTATGGTCCTCCTGGAACTGGTAAAACATTATTAGCAAAAGCTGTTGCTACAGAATGTTCCTTAAATTTTCTTAGTGTAAAAGGTCCTGAACTGATCAACATGTACATCGGAGAGTCTGAGAAGAATGTCCGAGACATTTTCCAAAAGGCCAGATCAGCACGTCCGTGTGTTATATTCTTCGACGAGCTTGATTCTCTAGCACCAGCTCGAGGTGCTTCTGGAGATTCCGGGGGTGTTATGGACAGAGTGGTCTCTCAGATGCTTGCAGAGATCGATGGCTTAAGTGATTCTACACAGGATCTGTTTATTATTGGTGCAAGTAATAGACCGGATTTGATAGACCCAGCACTTTTACGCCCTGGCCGATTTGATAAGCTGCTATATGTTGGAGTTAATGCTGACGCATCTTATAGAGAGCGGGTCTTGAAAGCACTTACCCGAAAGTTTAAACTGCACGAAGATGTTTCACTGTACTCTATAGCGAAAAAATGTCCACCAAACTTCACTGGCGCGGACATGTATGCCTTATGTGCAGACGCCTGGTTCCACGCTGCAAAGCGCAAGGTTTCAGGTGCAAATCCTGAGTCTTCCAGCCAAGATAATGGAGAAGATTCTGTTGTTGTTGAATACAGTGATTTTGTCCAGGTCTTAGGAGAGCTTCCCCCTTCCCTTTCCATGGCTGAGCTTAAGAAGTATGAACGACTTAGAGATCAGTTTGAGGGAACCTCTAAATAA 2832 0.4347 MVERRKPLVLSSTRHLISSLLNSSSVSDNPATTNTLFHHHDSSSSSTFHLPAGILRLSSNPNHHHPQFPSLDDSALIGLSTTLLKRLSVTSGSLVLVKNAEMGMQRVAVAIALDPPGTTVPELDSDSKLSCSSSQCSRMMLVFPSCDFPPNGALLFDHGVAYLSPLLAFNLNLHMSCLKSILQHGEDTLASYFKPQGGDEDAEKSIKDSVINIELEPFAQAPRFASHLRVSFVKLPECGVLESIRESSPVESKERQDMIDLALQKYFEVDRYLSRGDVFGININWNCNSTICIPCNQKSQKKNDNNFIYFKVIAMEPSDEPVLRVNRTLTALVLGGSSPSALPPNLLIAGPEGPVPLQGDTVKILASILTPTFCPSALSSKFRISVLLYGLAGCGKRTVVRYVARRLGLHVVEYNCHDLMRSERTSVTLAQAFKTAQRYSPAILLLRHFDVFRDSPSPEGSLNDQRGNTSEVASVIRKFTEPVSEHGDNNSQWKSNGEFVEKNVEKTSLHKVLLIAAADSSEGLPSTIRRCFSHEISMGSLTEEQRAEMLSHSLQSVSGLLSNTDSEGFVKEIVGQTSGYMPRDMCALIADAGANLFPRSNAEVDKDGPEDGDGSKVMENKDQKVSPQIPRKEDLMKALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKGLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVSGANPESSSQDNGEDSVVVEYSDFVQVLGELPPSLSMAELKKYERLRDQFEGTSK* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0562 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 606 IPR027417 -
Aev06g0562 943 MobiDBLite consensus disorder prediction 603 634 - -
Aev06g0562 943 CDD AAA 385 446 - -
Aev06g0562 943 PANTHER PEROXISOME ASSEMBLY FACTOR 2 25 939 - -
Aev06g0562 943 SMART AAA_5 693 833 IPR003593 -
Aev06g0562 943 SMART AAA_5 382 542 IPR003593 -
Aev06g0562 943 Gene3D - 655 932 IPR027417 -
Aev06g0562 943 MobiDBLite consensus disorder prediction 599 634 - -
Aev06g0562 943 Gene3D - 360 558 IPR027417 -
Aev06g0562 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 937 IPR027417 -
Aev06g0562 943 Pfam ATPase family associated with various cellular activities (AAA) 697 829 IPR003959 GO:0005524|GO:0016887
Aev06g0562 943 Pfam ATPase family associated with various cellular activities (AAA) 386 538 IPR003959 GO:0005524|GO:0016887
Aev06g0562 943 Gene3D - 831 917 - -
Aev06g0562 943 PANTHER AAA-FAMILY ATPASE 25 939 - -
Aev06g0562 943 ProSitePatterns AAA-protein family signature. 800 818 IPR003960 GO:0005524|GO:0016887
Aev06g0562 943 CDD AAA 691 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0562 Aev-Chr6 3929402 3934938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0562 663 900 Calmodulin-binding Proteins AT3G56690 38.912 9.23e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0562 K13339 - gmx:100820183 1431.39