Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0561 ATGGCAGCTCACACTAGTATTTCATCTTCTACTCGTTCACTCATCATCAGTACAACACAACCACCTCGTACTCTGCTTCTTCTCCACAATTCTAATTCTATGCTCTCCAGGTTGAGCCCTAGGTTCCTGCACTCTCCTTCTCTCCTTGTTCATCGCCTCCTTTTCTCTCTGCAACACCACCAACACCAACCCTCTAAACTGAAATTCCGATACTACCCTTTCTCACCTCTCAGAGTCAGAGCTGCCTCAATGGCATCATCGTCGTCATCTGATTCTCATCACAAGTACACCAATCGACTTGCTTCCGAGCAAAGCCCTTATCTTCTTCAACACAAACACAACCCTGTTGATTGGTACCCTTGGGGCGAAGAAGCTTTCGCCGAAGCACGCGCAAGAGATGCACCTATCTTCTTATCAATTGGATACAGCACTTGCCACTGGTGTCATGTTATGGAGGTCGAGTCTTTCGAGAATGAGGAGGTTGCCAAGTTGCTAAACGATTGGTTTGTTAGCATCAAGGTGGACCGAGAGGAGCGACCAGATGTTGATAAGGTGTACATGACATATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCCCTGAGTGTGTTTCTTTCACCTGACTTGAAACCTTTAATGGGTGGAACTTACTTCCCTCCTGATGATAAGTACGGACGACCAGGATTCAAGAGTATTCTTAGGAAGGTAAAAGAGGGGTGGGATAGTAAGAAGGATTTGCTAATTAAAAGTGGATCGGTTGCAATTGATCAGCTTTCTGAGGCGTTGTCTGCTAGTTCAATTTCTGATAAACTGCCTGATGGAGTTCATAATGATGCGTTACGTCGATGCTCTGAGCAACTCTCCGAGAACTATGATTCAAATTGCGGTGGGTTTGGATCTGCACCAAAGTTTCCCAGACCAGTTGAGATAAACTTGATGTTATACCACTCTAAAAAATTGGAGGCTGCTGGGAAGTTGACCAGAGCTAATGAGAGTCGGGAAATGGTTTTCTTTACATTGCAATGTATGGCTAAAGGGGGCATTCATGATCATATTGGTGGGGGTTTTCACAGATACAGTGTGGACGAGTGCTGGCATGTTCCACATTTTGAGAAGATGTTATATGATCAAGGGCAGCTTGTCAATGCTTATTTAGATGCTTTTTCTATCACAAACGATACTTTCTATTCATGTATATCGCGGGATATCTTGGATTATTTAAGGAGAGACATGATTGGTCCAGAAGGTGAAATCTTTTCAGCAGAGGATGCTGACAGTGCTGAGAGTGAAGGAGCTACAAGAAAAAAAGAAGGGGCATTTTACATATGGACCAGCAAAGAGGTTGAAGACATACTCGGAGAGCATGCTGATCTTTTTAAGAAGCACTATTATATAAAACAGTCGGGTAACTGTGACCTATCTACAATGAGTGATCCTCACAATGAATTCAAGGGAAAGAATGTCCTGTTCGAGAGAAAAGATCCTTCAGAAATGGCATCAAAATCTGGCATGTCAGTTGAGACATATAAAGAAATTCTTGGAGAATGTAGGCGAAAGCTGTTTGAAGAAAGATCAAAGCGGGCAAGGCCACATTTGGATGACAAGGTTATTGTATCTTGGAACGGGCTAGCAATATCATCCTTTGCTAGGGCTTCTAAGATTCTCAAGGGTGAAGCTGAAGGGACTAAATTCTATTTTCCTGTTGTTGGCTCTGAACCAAAGGAGTACATGCAAACTGCAGAAAAAGCAGCTTTATTTATTAGGAAGCGACTTTACAATGCAGAGACTCAAAGGCTATACCATAGTTTCAGAAATTCTCCATCTAAAGCTCCTGGTTTCTTGGATGATTACGCATTTCTGATTCATGGGTTGCTCGATCTCTATGAGTTTGGTGGTGGAATCACCTGGCTTCAATGGGCGATTGAGTTGCAGGAAACCCAGGATGCTTTGTTTCTTGATAAGGAAGGAGGCGGATATTTCAATAATACGGGAGAAGATCCTTCGGTTCTTCTCCGTGTGAAGGAAGATCATGATGGGGCAGAACCCTCTGGGAACTCAGTTTCCGCCATAAATCTCATACGATTGGCTTCCTTGGTTGCTGGAAATAAGGCCGAGCATTATAAGCGTAACGCGGAGCACCTTCTGACAGTGTTTGAGAAAAGATTGAAAGAGTTGTCCATGGCAGTGCCTCTCATGTGTTGTGCGGCGGACATGCTGCGTGTACCTTCCCGGAAGCAAGTGGTGGTGGTTGGAGAAAGGGATTCCGAGCAATTTGAAAGCATGCTTGCCGCAGCTCAGGCATCATATGATCCCAACAAAACAGTTCTTCATATAGACCCCAACAACAAGGAAGAGTTGGAATTTTGGGAAGCAAACAACAGCAACATTGCAGTGATGGCGAAGAATAATTATGCAGAAAACAAGTCTTATCCATTGACACTATCGTCAGTGGATACAATGAAATCAATCCATACGCCAAGGTTGTATTATTATGCAGCATTCCATTCCACAAAACCGAAGCCATCCATTGGAGATTCATGCACATACACACAGACACTACCCTTCACCCATTCTCAGAACCGGTTACTCTGTAAACCAATCTCCTGCTGCAAGGTCCAAACCACCAACCCCACCAGTTTCACTCTCTCTTACCTCATTGACTCCTGTGGTCTTTCTCCAGACACTGCTGCTTTGACTTCCCAAAAGCTTCACCTTCCTTCTGCAGAAAGACCAGACTCTGTTCTGACCCTTCTCAGAGAATCCGGTTTCTCAAATACCCAGATCTCAAATATCATCAGAAAACGCCCATTGCTTCTCTTGGCCAACCCAAAGGAGATTCTTTTGCCAAAGATTGAATTTTTCCTATCCATTGGCATTTCCAACTCTGACCTTGCAAGAACCCTAACTGCTGACCCAACCCTTCTGACAAGGAGCTTGGAGAAACAGATTATACCTTCTTACAAATTCCTCAAGAGTGTGTTGCTTTCTGATGAAAAGGTCGTAGCTTCCTTGAAGAGAACCTCTTGGGTCTTTCTTGAGGACCACAACAAGAACCTTGTACCCAACCTTAATGTCCTCAAGGAATTGGGTGTGCCGGAATCCTGTGTGTCACTGTTGCTGACACATTTTCCTGAGGCCTTGATGCAGAAAAAGGAGAACTTTGCAAAGCTCTCTGAGGAGATTAAGGGAATGGGGTTTGACCCAACGAAGACAATGTTTGTGTTGGCCATTCATGCGCTCTCAGGTGAGGGTAACAAGACCATTTATAACCGGTGTTATGAGGTTTATCAGAGGTGGGGTTGGTCAGATGATGACATTCTTTTGGCATTCAAGAAGCACCCTCATTGCATGATACTGTCAGAGGATAAGATAATGAAGACAATGGATTACTTGGTGAACAAGATGGGTTGGCCTTCAGGGATGATTGCTAGGTGCCCTGTAGTGTTGTTTTTCAGCTTGGAGAAGAGGATTAAACCTAGGTGCTCTGTTGTTAAGGTTTTGGTGTTGAAGGGTTTGATTAAGAGGACTTTGAGCTTGACTACTTTGCTATTGCCTGAGGAGAGTCGTTTCTTGGAGAAATTTGTGATCAAGTATGAACAGCATGTGCCTCAATTGTTGAGTGTGTATCAGAGAAAGTTGGATTATATGAGTGTTATTTGA 3660 0.4388 MAAHTSISSSTRSLIISTTQPPRTLLLLHNSNSMLSRLSPRFLHSPSLLVHRLLFSLQHHQHQPSKLKFRYYPFSPLRVRAASMASSSSSDSHHKYTNRLASEQSPYLLQHKHNPVDWYPWGEEAFAEARARDAPIFLSIGYSTCHWCHVMEVESFENEEVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPDDKYGRPGFKSILRKVKEGWDSKKDLLIKSGSVAIDQLSEALSASSISDKLPDGVHNDALRRCSEQLSENYDSNCGGFGSAPKFPRPVEINLMLYHSKKLEAAGKLTRANESREMVFFTLQCMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLVNAYLDAFSITNDTFYSCISRDILDYLRRDMIGPEGEIFSAEDADSAESEGATRKKEGAFYIWTSKEVEDILGEHADLFKKHYYIKQSGNCDLSTMSDPHNEFKGKNVLFERKDPSEMASKSGMSVETYKEILGECRRKLFEERSKRARPHLDDKVIVSWNGLAISSFARASKILKGEAEGTKFYFPVVGSEPKEYMQTAEKAALFIRKRLYNAETQRLYHSFRNSPSKAPGFLDDYAFLIHGLLDLYEFGGGITWLQWAIELQETQDALFLDKEGGGYFNNTGEDPSVLLRVKEDHDGAEPSGNSVSAINLIRLASLVAGNKAEHYKRNAEHLLTVFEKRLKELSMAVPLMCCAADMLRVPSRKQVVVVGERDSEQFESMLAAAQASYDPNKTVLHIDPNNKEELEFWEANNSNIAVMAKNNYAENKSYPLTLSSVDTMKSIHTPRLYYYAAFHSTKPKPSIGDSCTYTQTLPFTHSQNRLLCKPISCCKVQTTNPTSFTLSYLIDSCGLSPDTAALTSQKLHLPSAERPDSVLTLLRESGFSNTQISNIIRKRPLLLLANPKEILLPKIEFFLSIGISNSDLARTLTADPTLLTRSLEKQIIPSYKFLKSVLLSDEKVVASLKRTSWVFLEDHNKNLVPNLNVLKELGVPESCVSLLLTHFPEALMQKKENFAKLSEEIKGMGFDPTKTMFVLAIHALSGEGNKTIYNRCYEVYQRWGWSDDDILLAFKKHPHCMILSEDKIMKTMDYLVNKMGWPSGMIARCPVVLFFSLEKRIKPRCSVVKVLVLKGLIKRTLSLTTLLLPEESRFLEKFVIKYEQHVPQLLSVYQRKLDYMSVI* 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0561 1219 Gene3D Transcription termination factor 3, mitochondrial 973 1204 IPR038538 -
Aev06g0561 1219 SUPERFAMILY Six-hairpin glycosidases 286 680 IPR008928 GO:0005975
Aev06g0561 1219 Pfam mTERF 915 1067 IPR003690 GO:0003690|GO:0006355
Aev06g0561 1219 Pfam mTERF 1035 1190 IPR003690 GO:0003690|GO:0006355
Aev06g0561 1219 Pfam Protein of unknown function, DUF255 97 257 IPR004879 -
Aev06g0561 1219 Gene3D Glutaredoxin 95 266 - -
Aev06g0561 1219 Gene3D - 568 747 IPR012341 GO:0005975
Aev06g0561 1219 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 84 822 IPR024705 -
Aev06g0561 1219 SUPERFAMILY Thioredoxin-like 96 241 IPR036249 -
Aev06g0561 1219 CDD SSP411 119 241 IPR004879 -
Aev06g0561 1219 SMART mt_12 1139 1173 IPR003690 GO:0003690|GO:0006355
Aev06g0561 1219 SMART mt_12 929 960 IPR003690 GO:0003690|GO:0006355
Aev06g0561 1219 SMART mt_12 965 996 IPR003690 GO:0003690|GO:0006355
Aev06g0561 1219 SMART mt_12 1107 1138 IPR003690 GO:0003690|GO:0006355
Aev06g0561 1219 SMART mt_12 1001 1032 IPR003690 GO:0003690|GO:0006355
Aev06g0561 1219 SMART mt_12 1037 1067 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0561 Aev-Chr6 3921839 3928396 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev06g0561 mTERF 5.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0561 - - ahf:112695829 1291.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0561 06 3921839 3928396 Aev06g0561 06 3921839 3928396 ECH