Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0546 ATGGCTTCAACAAGCAGCAACGTTGTTGAGGCGCTCAACGTGGAGGACGAAGAACACAATCTGATCTTGCCCTTACTCAAAGCCAAGGTTCACGGCTATCCTTTGCCGCCTACTGATGTGGTCATTCATGAGTGTGACCTCTGCAGTGACAAGAACCCTTGGGAGATTTGGGAACTGCTTGGAGGTGCCAAGGTGGACAGGCTTTACATGTTCAGCATCCTCAGGATGAACATGGCCTCCGGAGACGTGGTTCGCGCCGTTGGGTGTGGTTCATGGGAAGACCAACACAAAGATGCAGATATTGTGTGCCCCGACACAAAGCAAATTGTTGCAGTGAAGAAATGTTTTTGGTTTGACAAGAGTGACACCGCTCACGACGGTGCCTGGATCATGCATGAATACCGTCTTGTCACTTCTGATCTCCTCCGCAGACCACCATCAGTAACAACCACCACCAGTACCTACATTTATATATTATATTGTTTATATGATGAGTTGTATCCCAATTACAGCCATGTGCTATGCAAATTGATGAAGAAGCAAGGACGTATTCGGGTGAGAAGAATGGGTCAGCCGCCGGAAACAGCGCAAACCATCATGCTTCCATTCCCGTCTAATCCCTCTGCACCTGCAAGTAATGAACGCTGGAGACTAGTGAGGTTAGGAAGCGAGCCAATCGAAGCAGAAGTTGCAGATCATAATAAGAGGCTCAAGGTGGAAAAGACAACCCCTGATGATCAGAAGAATGACCAATAA 756 0.4788 MASTSSNVVEALNVEDEEHNLILPLLKAKVHGYPLPPTDVVIHECDLCSDKNPWEIWELLGGAKVDRLYMFSILRMNMASGDVVRAVGCGSWEDQHKDADIVCPDTKQIVAVKKCFWFDKSDTAHDGAWIMHEYRLVTSDLLRRPPSVTTTTSTYIYILYCLYDELYPNYSHVLCKLMKKQGRIRVRRMGQPPETAQTIMLPFPSNPSAPASNERWRLVRLGSEPIEAEVADHNKRLKVEKTTPDDQKNDQ* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0546 251 Pfam No apical meristem (NAM) protein 18 136 IPR003441 GO:0003677|GO:0006355
Aev06g0546 251 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 19 187 - -
Aev06g0546 251 MobiDBLite consensus disorder prediction 230 251 - -
Aev06g0546 251 SUPERFAMILY NAC domain 18 180 IPR036093 GO:0003677|GO:0006355
Aev06g0546 251 Gene3D NAC domain 17 184 IPR036093 GO:0003677|GO:0006355
Aev06g0546 251 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 19 187 - -
Aev06g0546 251 ProSiteProfiles NAC domain profile. 8 180 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0546 Aev-Chr6 3859307 3860235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0546 16 136 NAC Transcription Factor Family AT5G13180 37.097 4.96e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev06g0546 NAM 1.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0546 - - aprc:113871407 109.383