Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0545 ATGTCTTCAACAAGCAGCAATGTTGTTGAGCCGCTCAACGTGGAGGATGAAGAACACAATCTGATCTTGCCCTTACTCAAAGCCAAGGTTCACGGTGATCCTTTGCCGCCAACAGATGAGGTCATTCATGAGTGTGACCTGTTCGGTGACAAGAACCCTTGGGAGATTTGGGAACTGCTTGGAGGTGCCAAGGAGGTAGTGGATGATGATGCGCTTTACATCTTCAGCACCCTCAGGATGAACATGGCCTCCGGAGACGTGGTTCGCACCATTGGCTCTGGTTCATGGGAAGATCAACACAAAGATAGAGATATTGTGTGCCCGGACACAAACCAAAGTCTTGCCGCCAAGAAATGTTTAATGTTCGACAAGAGCGGTACCACTCACGACGGTGCCTGGATCATGCATGAATACCGTCTCCTCTCTTCTGATCTCCTCCGCAAACCACCATCACCCAATTACAGCCATGTCCTATGCAAATTGATGGAGAATCTAGGACCTATGCCGGAGAGTCCTCCGCCGGAAACTGCCCAAACCGCCATGTTTCCATTCCCGCTTAGTCACTCTCCACCTACTATTGATTGTAATGAACGCTGGAGACTAGTGAAGATAGAAAGGGAGCCAATCCAAGTAGAAGTTGCAGATCATAATAAGAGGCTCAAGGGGAAAAAGACAACCGCTGATGATCATGAAGAATGA 699 0.4864 MSSTSSNVVEPLNVEDEEHNLILPLLKAKVHGDPLPPTDEVIHECDLFGDKNPWEIWELLGGAKEVVDDDALYIFSTLRMNMASGDVVRTIGSGSWEDQHKDRDIVCPDTNQSLAAKKCLMFDKSGTTHDGAWIMHEYRLLSSDLLRKPPSPNYSHVLCKLMENLGPMPESPPPETAQTAMFPFPLSHSPPTIDCNERWRLVKIEREPIQVEVADHNKRLKGKKTTADDHEE* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0545 232 Pfam No apical meristem (NAM) protein 18 140 IPR003441 GO:0003677|GO:0006355
Aev06g0545 232 Gene3D NAC domain 17 166 IPR036093 GO:0003677|GO:0006355
Aev06g0545 232 ProSiteProfiles NAC domain profile. 8 164 IPR003441 GO:0003677|GO:0006355
Aev06g0545 232 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 19 163 - -
Aev06g0545 232 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 19 163 - -
Aev06g0545 232 SUPERFAMILY NAC domain 19 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0545 Aev-Chr6 3855722 3856975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0545 16 162 NAC Transcription Factor Family AT5G13180 34.667 3.46e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev06g0545 NAM 7.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0545 - - aprc:113871407 132.88