Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0513 ATGGCATCAAGATTCTGGACTCAGGGTGATAGTGATTCCGAAGAAGAAAGCAGTGATTATGATGAGGAGGTTGAGACGACGGCTGGTGAGTCTGCTGCTCAAGCCGTTTCTAACAGGTACTTGCAAGAAAACGCAAGTGACTCCGACGACTCTGATGGGCAAAAGCGTGTGGTTCGGTCTGCCAAGGATAAGCGATTCGAGGAGATGGCTGCCACTGTTGATCAGATGAAGAATGCCATGAAGATTAATGATTGGGTGAGCTTGCAGGAGAGCTTTGATAAGATCAACAAGCAGCTCGAGAAGGTTATGCGTGTGACCGAGTCTGAGAAGGTCCCAAATCTTTACATTAAGGCCCTTGTGATGTTGGAGGATTTCTTGGCTCAAGCTTTGGCCAACAAGGATGCCAAGAAGAAGATGAGTAGCAGCAATGCCAAGGCTCTGAACTCGATGAAACAGAAGTTGAAGAAGAATAACAAGCAGTATGAGGAATTGATTAACAAGTGCAGGGAGAATCCTGAGAGTGACGAGGAGAAGGAGCCAGAGGACGAGTCAGAGGAAGAGGATGAGAGTGATGATGAGATTATCGAGCCTGACCAGCTCCAAGGAAGGACCGATATACAATCGGATTCAGAGGCTTCTCATTACGACGATGAAAAGCAAGATGCTGAAGGACCTTGGGACCAAAAGCTTAGCAAGAAAGATAGGCTTTTGGATAGGCAGTTTATGAAGGATCCTAGTGAGATCACTTGGGATACAGTTAACAAGAAGTTCAAGGAGGTTGTGGCAGCTAGGGGTAGGAAGGGAACCGGAAGGTTTGAGCAGGTTGAGCAGCTTACTTTTCTGACCAAAGTTGCTAAAACACCAGCACAGAAGCTTGAAATTCTCTTCAGTGTGGTTTCTGCTCAGTTTGATGTTAATCCTGGCTTAAGTGGGCATATGCCTATAAATGTTTGGAAAAAATGTGTGCAGAACATGCTGGTTATCCTCGATATCCTAGTGCAGTACCCTAACATTGTGGTCAGTGAGTCTGTGGAGCCTGATGAGAATGAAACTCAGAAAGGAGCTGACTATAATGGAACAGTTCGGGTTTGGGGTAATTTGGTTGCTTTCTTGGAAAGAATTGATGCTGAGTTTTTCAAGAGCCTGCAGTGTATTGATCCTCATACCCGTGACTATGTTGAGAGACTCAGGGATGAGCCAATTTTTATGGTTCTTGCTCAGAATGTCCAGGAATACCTTGAAAGGGTTGGAGATTTCAAAGCTGCTTCTAAGGTGGCCTTGAGGAGGGTTGAACTCATTTACTACAAACCACAAGAGGTGTATGATGCCATGAGAAAATTGGCTGAGCTGACAGAAGATGGAGACAATGAAGGTGGGGCTAGTGAGGAGAAAGGGTTTGAGGATACTAGAATTCCCACTGCATTTGTTGCTACCCCAGAGGTTGTTCCCCGCAAACCCACCTTCCCTGAGAATAGCAGGACTCTAATGGATATATTGGTATCACTGATTTACAAATATGGAGATGAGCGCACTAAAGCACGGGCAATGCTCTGTGATATATATCATCATGCTCTTCTTGATGAGTTCTCCATAGCCCGTGATCTTCTGCTTATGAGCCATTTGCAAGAAAGTGTTCAGCATATGGACATCTCGACTCAGATACTTTTCAACAGGGCTATGTCACAGTTGGGTCTTTGTGCTTTTAGGGTTGGACTGATTTCTGAAGCACATGGCTGCCTATCTGAACTTTATTCTGGTGGAAGGGTGAAGGAATTGCTTGCACAAGGTGTGGCTCAAAGTCGTTATCATGAGAAGACTCCTGAACAGGAAAGGTTGGAAAGAAGACGTCAGATGCCCTACCATATGCACATAAATCTTGAGCTCCTTGAGGCAGTGCATCTTATTTCCGCTATGCTGCTTGAAGTTCCCAATATTGCAGCCAATATCCATGATGCAAAGCGCAAGGTCATTAGTAAGACTTTCCGTCGCTTGCTTGAGGTCAGTGAGAAGCAAACGTTCACTGGTCCACCTGAAAATGTCAGAGATCATGTTATGGCTGCCACAAGGGCTCTCACCAAAGGAGACTTCCACAAGGCATTTGATATTATCGTGTCTCTTGATGTATGGAAATTTGTTAGAAACCGTGACACTGTCCTTGAAATGCTGAAGGACAAAATCAAGGAAGAGGCGCTGAGGACATATCTCTTTACCTTCTCCTCAGCTTATGATTCTTTGAGCCTGGATCAACTCACTAAAATTTTTGACCTCTCTGTTCCTCACACTCACAGCATTGTTAGTAGGATGATGATCAATGATGAGCTTCATGCAAGCTGGGACCAGCCAACCGGGTGCATTGTTTTCCAGGATGTCGAGCACTCTAGGTTGCAGGCATTGGCATTCCAGCTGACAGAGAAGTTATCTATCCTTGCAGAGAGCAACGAAAGAGCAATGGAGGCAACAATTGGTGGTGGTGGGTTGGAGCTTCCTATGAGGCGTAGAGATGGCCAGGACTATGCTGCTGCTGCCGCCGGTGGAACAGCCTCTTCTGGAGGTGGTAGGTGGCAGGAATTGTCCCTTTCTCAGCCAAGGCAAGGTGGTGGACGATATGGTAGCGGAGGTGGAAGGCCCATGGCTCTAGGCCAAGCTGGTGGGGGTGGATATTCAAGGGACCGACGAACTGGTTCAGGCCGTTATCAAGATTCTGCATATGGAGGCTCAGGGAGGAGTGGTCAAGGATTGAGGGGACCCCATGGGGATGTACCATCTCGCATGGTTAGCCTTAAGGGAGTACGCGCTTAA 2799 0.4662 MASRFWTQGDSDSEEESSDYDEEVETTAGESAAQAVSNRYLQENASDSDDSDGQKRVVRSAKDKRFEEMAATVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPNLYIKALVMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEELINKCRENPESDEEKEPEDESEEEDESDDEIIEPDQLQGRTDIQSDSEASHYDDEKQDAEGPWDQKLSKKDRLLDRQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLSGHMPINVWKKCVQNMLVILDILVQYPNIVVSESVEPDENETQKGADYNGTVRVWGNLVAFLERIDAEFFKSLQCIDPHTRDYVERLRDEPIFMVLAQNVQEYLERVGDFKAASKVALRRVELIYYKPQEVYDAMRKLAELTEDGDNEGGASEEKGFEDTRIPTAFVATPEVVPRKPTFPENSRTLMDILVSLIYKYGDERTKARAMLCDIYHHALLDEFSIARDLLLMSHLQESVQHMDISTQILFNRAMSQLGLCAFRVGLISEAHGCLSELYSGGRVKELLAQGVAQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLISAMLLEVPNIAANIHDAKRKVISKTFRRLLEVSEKQTFTGPPENVRDHVMAATRALTKGDFHKAFDIIVSLDVWKFVRNRDTVLEMLKDKIKEEALRTYLFTFSSAYDSLSLDQLTKIFDLSVPHTHSIVSRMMINDELHASWDQPTGCIVFQDVEHSRLQALAFQLTEKLSILAESNERAMEATIGGGGLELPMRRRDGQDYAAAAAGGTASSGGGRWQELSLSQPRQGGGRYGSGGGRPMALGQAGGGGYSRDRRTGSGRYQDSAYGGSGRSGQGLRGPHGDVPSRMVSLKGVRA* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0513 932 MobiDBLite consensus disorder prediction 175 195 - -
Aev06g0513 932 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 43 652 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Aev06g0513 932 MobiDBLite consensus disorder prediction 209 230 - -
Aev06g0513 932 MobiDBLite consensus disorder prediction 134 230 - -
Aev06g0513 932 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 877 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Aev06g0513 932 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 931 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Aev06g0513 932 MobiDBLite consensus disorder prediction 12 26 - -
Aev06g0513 932 Pfam PCI domain 660 788 IPR000717 -
Aev06g0513 932 ProSiteProfiles PCI domain profile. 620 792 IPR000717 -
Aev06g0513 932 MobiDBLite consensus disorder prediction 851 865 - -
Aev06g0513 932 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 721 809 - -
Aev06g0513 932 MobiDBLite consensus disorder prediction 155 174 - -
Aev06g0513 932 MobiDBLite consensus disorder prediction 135 154 - -
Aev06g0513 932 MobiDBLite consensus disorder prediction 45 63 - -
Aev06g0513 932 SUPERFAMILY "Winged helix" DNA-binding domain 716 791 IPR036390 -
Aev06g0513 932 MobiDBLite consensus disorder prediction 1 63 - -
Aev06g0513 932 Gene3D - 727 796 IPR036388 -
Aev06g0513 932 MobiDBLite consensus disorder prediction 839 932 - -
Aev06g0513 932 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 1 931 - -
Aev06g0513 932 Coils Coil 144 171 - -
Aev06g0513 932 SMART PINT_4 721 809 IPR000717 -
Aev06g0513 932 MobiDBLite consensus disorder prediction 30 44 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0513 1 932 Eukaryotic Initiation Factors Gene Family AT3G56150 69.338 0.0 1209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0513 K03252 - gmx:100781967 1534.62