Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0509 ATGGATTCTGGGATTAAGCATGCAATTGTTGTCAAGGTTATGGGCCGTACTGGGTCCAGAGGACAGGTGACCCAGGTTAGAGTGAAGTTCTTGGATGATCAGAACCGTCACATTATGAGGAACGTGAAAGGACCAGTCAGAGAAGGTGACATTCTCACCCTTCTCGAGTCCGAGAGAGAAGCAAGGAGCGCTAACTCTCTCTGTTGCACTATCTCTTCAGCCATGGCCGACACCGCCGCTGTCGCTGTCGAAACCGATCCCACTCAGCTCGATGTCAAGCTCTTCAACGCCTGGAGCTATGAGGAAGCCCAGGTGAATGATATTTCTTTGGCGGATTATATCGGAGTTGTTCCGTCGAAGCATGCGACTTACGTTCCTCACACCGCCGGAAGGTACTCAGTGAAGCGTTTCAGGAAGGCACAGTGCCCCATTGTTGAGAGGCTTACAAACTCGCTCATGATGCACGGAAGAAACAATGGAAAGAAGCTCATGGCTGTTAGGATCGTTAAGCACGCCATGGAAATCATCCACTTGCTTACTGACCAGAACCCCATTCAAGTCATTGTTGATGCTGTCATCAACAGTGGTCCCCGTGAAGATGCAACCAGAATAGGATCTGCTGGTGTTGTGAGGAGACAGGCGGTGGATATCTCACCACTGCGCCGTGTTAACCAGGCCATCTACCTGCTAACAACAGGTGCACGTGAAGCTGCATTCAGAAACATCAAGACAATTGCCGAGTGCTTGGCTGATGAACTCATTAACGCAGCCAAAGGTTCATCCAACAGCTATGCTATCAAGAAGAAGGATGAGATAGAGAGAGTTGCCAAGGCTAACCGTTAA 843 0.497 MDSGIKHAIVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESEREARSANSLCCTISSAMADTAAVAVETDPTQLDVKLFNAWSYEEAQVNDISLADYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0509 280 Pfam Ribosomal protein S28e 5 62 IPR000289 GO:0003735|GO:0005840|GO:0006412
Aev06g0509 280 Gene3D Ribosomal protein S7 domain 73 280 IPR036823 -
Aev06g0509 280 Gene3D - 1 64 IPR012340 -
Aev06g0509 280 PANTHER 40S RIBOSOMAL PROTEIN S5 77 280 - -
Aev06g0509 280 PANTHER RIBOSOMAL PROTEIN S7 77 280 IPR000235 GO:0006412
Aev06g0509 280 CDD uS7_Eukaryote 93 280 IPR005716 GO:0003735|GO:0006412|GO:0015935
Aev06g0509 280 Pfam Ribosomal protein S7p/S5e 134 280 IPR023798 -
Aev06g0509 280 TIGRFAM uS7_euk_arch: ribosomal protein uS7 92 280 IPR005716 GO:0003735|GO:0006412|GO:0015935
Aev06g0509 280 ProSitePatterns Ribosomal protein S7 signature. 146 172 IPR020606 GO:0003723|GO:0003735|GO:0006412
Aev06g0509 280 Coils Coil 265 280 - -
Aev06g0509 280 CDD S1_S28E 6 62 IPR000289 GO:0003735|GO:0005840|GO:0006412
Aev06g0509 280 Hamap 30S ribosomal protein S28e [rps28e]. 1 65 IPR000289 GO:0003735|GO:0005840|GO:0006412
Aev06g0509 280 SUPERFAMILY Ribosomal protein S7 93 280 IPR036823 -
Aev06g0509 280 SUPERFAMILY Nucleic acid-binding proteins 3 64 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0509 Aev-Chr6 3650440 3654550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0509 91 280 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 91.053 1.77e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0509 K02989 - gmx:100803239 368.622