Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0494 ATGCGGAGCTTGATGATGAAGAACTTGTTGACCCATGTCACAAGAACCACAAAGAAGAAAAACAGAAAAAGACGCAAACTTTCTAATCAAACCAACTCAGGAAACTGCATTTCCATCTCAAAGGAGTTACCTTGTCCGCAACAAGAAGAAGAAGATGCTGACGAAGGTTTCAGCCTCAAAAGCTCTGCCCCATCGCACACTCATGGAGTTCAACCTTTGGGGAACCTTTATCTCAACCCAGGTTCCATCAACTCCAGAGACACGGGTTTAGGTAACCTTCATGCCCTTTCTGATGAGCTTGTTCTTGAGATTCTTGGGTTCTTGGATGGTGCTGGCTTGGGGGTTCTGGCCACTGTGAGTAAATCTTTTTATGTCTTCGCAAACCATGAACCCCTTTGGAGGAATCTTGTATTGGAGAATCTCCTTGGTGGGTTTCAGTTTCATGGGTCTTGGAAATCCACTTATTTAGCTGCTTGCTACCCTTCATTTGAATTACCAAGTAATGCAATTGAGAGCTTCAAAGTTAGAGACTTTTATTCTGATTATCTCTTCCAGAGTTGGCTCTGTGCCAATCTTGAAATGAAGCCTGAGTGGTTGGAGAGGGATAATATAGTTAGGAAGAGAGGTATTTCGGTTGAAGAGTTTGTGTTGAAGTTTGAGGAGCCTAATAAGCCGGTGTTGTTGGAAGGGTGTATTGATGATTGGGATGCTTTGAGAAATTGGGATAGAGGTTACTTGATGAAGTTGTGTGGTGATGTTAAGTTTGCAGTTGGGCCAGTAGAAATGAAGCTTGGAGACTATTTCGGATACTCAGATCAAGTTAGAGAAGAAAGGCCTTTGTATTTGTTTGATCCAAAATTTGCTGAAAAAGTTCCGAGATTGGGTTCTGAATATGAAGTTCCAGTGTACTTCCGGGAGGACTTGTTTAATGTTTTGGGAAATGAGAGACCTGATTACAGGTGGATTATTATTGGTCCGGCCGGATCCGGATCATCTTTCCATGTTGATCCGAATTCAACTTCAGCTTGGAATGCAGTGATTAAGGGGTCCAAGAAATGGATATTGTTTCCTCCTGATGTGATTCCACCTGGAGTCCATCCTAGTCCTGATGGTGCAGAGGTGGCTTCACCAGTTTCGATAATGGAGTGGTTCATGAACTTTTATGGTGCAACAAAGAATTGGAAAAAGAAGCCTATTGAGTGTGTATGTAAAGCTGGGGAAGTTATCTTTGTGCCTAATGGATGGTGGCATCTGGTGATCAACATGGAGGAGTCTATAGCCATAACTCAGAACTATGTTAGTAGGAGAAATCTGATAAATGTGTTGGATTTTCTCAAAAGGCCAAATGCTAGCACACTAGTGTCCGGAACAAGGGATCGAGTGAACCTATATGATAAGTTTAAGAATGCTATTGAGGCTTCTCTTCCTGGAGAAATTGATGAACTGACCCAAAAAGAAGCAGAGAAAAAGATGCAACAGAAGAAGCCTTCCTTCTGGGATTCTGTCACAGATTCCAATGCAGGAGCTTTCAAGTTCTCATTCTAG 1545 0.4233 MRSLMMKNLLTHVTRTTKKKNRKRRKLSNQTNSGNCISISKELPCPQQEEEDADEGFSLKSSAPSHTHGVQPLGNLYLNPGSINSRDTGLGNLHALSDELVLEILGFLDGAGLGVLATVSKSFYVFANHEPLWRNLVLENLLGGFQFHGSWKSTYLAACYPSFELPSNAIESFKVRDFYSDYLFQSWLCANLEMKPEWLERDNIVRKRGISVEEFVLKFEEPNKPVLLEGCIDDWDALRNWDRGYLMKLCGDVKFAVGPVEMKLGDYFGYSDQVREERPLYLFDPKFAEKVPRLGSEYEVPVYFREDLFNVLGNERPDYRWIIIGPAGSGSSFHVDPNSTSAWNAVIKGSKKWILFPPDVIPPGVHPSPDGAEVASPVSIMEWFMNFYGATKNWKKKPIECVCKAGEVIFVPNGWWHLVINMEESIAITQNYVSRRNLINVLDFLKRPNASTLVSGTRDRVNLYDKFKNAIEASLPGEIDELTQKEAEKKMQQKKPSFWDSVTDSNAGAFKFSF* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0494 514 Pfam Cupin-like domain 214 432 IPR041667 -
Aev06g0494 514 Gene3D - 86 161 - -
Aev06g0494 514 ProSiteProfiles JmjC domain profile. 289 449 IPR003347 -
Aev06g0494 514 Gene3D Cupin 186 434 - -
Aev06g0494 514 SUPERFAMILY Clavaminate synthase-like 206 446 - -
Aev06g0494 514 MobiDBLite consensus disorder prediction 28 42 - -
Aev06g0494 514 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 59 512 - -
Aev06g0494 514 SUPERFAMILY F-box domain 88 159 IPR036047 GO:0005515
Aev06g0494 514 SMART cupin_9 280 449 IPR003347 -
Aev06g0494 514 MobiDBLite consensus disorder prediction 16 68 - -
Aev06g0494 514 PANTHER AND JMJC DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G08170)-RELATED 59 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0494 Aev-Chr6 3574596 3576927 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0494 81 438 Glycosyltransferase AT1G78280 38.147 9.09e-76 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aev06g0494 Cupin_8 9.9e-23 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0494 - - lja:Lj1g3v4753250.1 887.486