Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0488 ATGGAGAAGGTTCCAGAGATGGAAGGCAAGACTGGAAGTCACATGACATCCGCTGCGGCCTTTGTTGAAGGAGGGATTCAAGACTCATGCGATGATGCTTGCAGCATATGCCTTGAGGAATTTTGCAAAAGTGATCCTTCAACGGTCACTACTTGCAAGCATGAATTTCACTTGCAGTGCATTCTTGAATGGTGTCAGAGAAGCTCCCAGTGTCCTATGTGTTGGCGACCTATTAGCTTGAAGGATGCAACCAGTCAAGAACTGTTTGAGGCAGTAGAGCATGAAAGGAACTTGAGGGTTAACCCACCAAGAAATGCTGCTATCTTTCGTCACCCTGCCTTTGGTGATTTTGATTTGCAGCATCTACGCATGGGCGATGCCGATTTTGAAGAGCGAATAATTCAACACTTAGCTGCTGCAGCAGCAATGGGGAGAGCTCATCACCTTGGTCGGAGGGAAGGGCAGCGAACTAGGATATCTGCTCATGGTCATCCACAGTATGTTGTGTTCTCAACTCAGTCTAGTGCACCTTCAGGTCATGTTTCAGCTGCTGGAGGGCGGAATGAACCAGATGTGATTCCTATAGGAAGTCCATCTAGCCCGATTGCATTTGATGGAGGTTCTGCATCACAGCCAATCCCATATCTTCAAACTCAAAGATCTTCTCCAGCTCTTGGATCTGCTACTGTCATTGCAGCAAATCGTCAAGGAACTAATGCTTATGATAGAGGCTCTACTGTTCAATCTTCACCAGCTGACCAGGATGGAGCTGGGCCATCAGAATTCCAGTCATTTTCTGATTCTCTGCGGTCCAAACTTAATTCGATGTCCCTGAGATACAAAGAGTCGATTTCAAAGGGTGCAAGGGGGTGGAAGGAGAGGCTGTTTGCGCGTAGTTCGTCCTTGTCAGAAACTGGTCCAGAAGCTAGGAGGAGAGAGGCTGGAGTTGCTGGTGTCTCTCGATTGACGGAATCTCACTCACTTCAAAGTATACGAACTAGTAGAGTTGTGGGCTCTTCTTCTTTGTCAAATCATTTGGAGGATCATTCCATTGCAGAGGTGAGTTACCAGAACAGCGTGGGAGCTAGAGGAGAGAACTCTTCACGTGAGAACAATACTCCGGCTGCTTGTTCTGCAGGCTCTCGTTCAGATTGA 1155 0.4753 MEKVPEMEGKTGSHMTSAAAFVEGGIQDSCDDACSICLEEFCKSDPSTVTTCKHEFHLQCILEWCQRSSQCPMCWRPISLKDATSQELFEAVEHERNLRVNPPRNAAIFRHPAFGDFDLQHLRMGDADFEERIIQHLAAAAAMGRAHHLGRREGQRTRISAHGHPQYVVFSTQSSAPSGHVSAAGGRNEPDVIPIGSPSSPIAFDGGSASQPIPYLQTQRSSPALGSATVIAANRQGTNAYDRGSTVQSSPADQDGAGPSEFQSFSDSLRSKLNSMSLRYKESISKGARGWKERLFARSSSLSETGPEARRREAGVAGVSRLTESHSLQSIRTSRVVGSSSLSNHLEDHSIAEVSYQNSVGARGENSSRENNTPAACSAGSRSD* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0488 384 MobiDBLite consensus disorder prediction 299 327 - -
Aev06g0488 384 MobiDBLite consensus disorder prediction 237 268 - -
Aev06g0488 384 ProSiteProfiles Zinc finger RING-type profile. 34 74 IPR001841 -
Aev06g0488 384 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 6 383 - -
Aev06g0488 384 SUPERFAMILY RING/U-box 27 81 - -
Aev06g0488 384 Pfam Ring finger domain 33 74 IPR001841 -
Aev06g0488 384 SMART ring_2 34 74 IPR001841 -
Aev06g0488 384 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 6 383 - -
Aev06g0488 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 84 IPR013083 -
Aev06g0488 384 MobiDBLite consensus disorder prediction 173 215 - -
Aev06g0488 384 MobiDBLite consensus disorder prediction 358 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0488 Aev-Chr6 3531556 3535309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0488 31 74 C3H Transcription Factor Family AT5G15790 52.273 8.79e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0488 K19043 - gmx:100800419 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0488 06 3531556 3535309 Aev02g0441 02 3301662 3304506 PCT