Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0479 ATGAGCAACACAACAGATCCAACAGGGTTACTTGGGAGCAGCAACATCAGTGGCTATGGCTATGGCATAGGAATTTCAATTGGGATTCTGCTTCTCATCATAACAATAACTCTTGCCTCCTACTTCTGCACAAGAACACAAGTCTCAAATGCTCCATCTACTACTGCTAGGAGACGCACACTCAATGCCCTTGAACCACACCACTCTGCAATCGATGTTGGGCTGGATGAAGCAACAATTCTGAGCTATCCAAAGCTTCTTTACTCAGAAGCCAAGATGAAGAAAACTAGTGATTCAACTGCATCATGCTGTTCCATATGTTTAGCAGATTACAAAGGAACTGATATGGTAAGGGTATTGCCTGATTGTGGCCACCAGTTCCACCTCAAGTGCATTGATCCTTGGTTGAGGCTTCATCCTACGTGTCCTGTTTGTAGAACATCTCCAATACCAACACCCCTCTCAACACCTCTTGCTGAAGTTGTTCCATTAGCAATAGCAAGCAGATCAGCAGATTGA 519 0.4432 MSNTTDPTGLLGSSNISGYGYGIGISIGILLLIITITLASYFCTRTQVSNAPSTTARRRTLNALEPHHSAIDVGLDEATILSYPKLLYSEAKMKKTSDSTASCCSICLADYKGTDMVRVLPDCGHQFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEVVPLAIASRSAD* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0479 172 PANTHER RING-H2 FINGER PROTEIN ATL70-LIKE 6 166 - -
Aev06g0479 172 Pfam Ring finger domain 104 146 IPR001841 -
Aev06g0479 172 SUPERFAMILY RING/U-box 103 151 - -
Aev06g0479 172 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Aev06g0479 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 150 IPR013083 -
Aev06g0479 172 CDD RING-H2_PA-TM-RING 103 146 - -
Aev06g0479 172 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 166 IPR045899 -
Aev06g0479 172 SMART ring_2 104 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0479 Aev-Chr6 3465137 3465655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0479 2 165 C3H Transcription Factor Family AT2G35910 62.651 1.29e-61 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0479 - - gmx:100811799 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0479 06 3465137 3465655 Aev02g2053 02 22135492 22136034 PCT