Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0475 ATGAACGACTTGCTTTCTCCTCCACGTGAGGACAGCAACAACAACGGCCACCACGTGATCCAGATGGCGGAGATGTCGCCGGACAACAGCCTTGGCAAGTTCTTTGAGGAGGTGGAGTCTCTGAAGAAGGAACTGAAAGAGCTCGAGAAGCTCCATCAGAGCCTCCGAGACTCCAATGAGAAGAGCAAGGCCCTTCACAGCGCGCAGGCCGTGAAGGACCTTCGCTCCCGCATGGATGCTGACGTGGCAGCCGCGCTCAAGAAAGCAAAGCTGGTGAAGGCCCGGTTAGAGGCACTGGACCGGGCCAACGAGGGCAGCCGGGCCCAACCGAATTGTGGGCCGGGATCATCGTCGGACAGGACGCGGACATCGGTGGTGAGCGGGCTGAGGAAGAAGCTGAAGGAGTCGATGGAGAGTTTTAATAAACTGAGGGAGCAGATATCGTCAGAGTACAGAGAGACCGTACAGCGCAGGTATTATACGGTCACCGGCGAGAATCCTGATGATAAAACCATCGACCTCCTCATCTCTACAGGGGAGAGTGAAACATTTTTACAGAAAGCGATCCAGCAGCAGGGGAGAGCGTCAGTGATGGAGACGATAGAGGAGATCCAAGAGAGGCACGGCGCCGTGAAGGAGATAGAGAGGAATCTCAACGAGCTGCACCAAGTGTTCTTGGACATGTCAGTCCTGGTCCAAGCCCAGGGCGAGCACTTGGATGACATTGAGAGCCACGTGGCGCGAGCCAATTCCTACGTCAGGGGTGGGGTGCAGCAACTCACGGTTGCTAGGAAGCACCAGAAGAACACCCGTAAATGGACCTGTTTTGCCATCATACTCCTCCTCATTATCATCTTCATTATTGTTCTCCCCATTGTTTTACGAAATTAA 891 0.5443 MNDLLSPPREDSNNNGHHVIQMAEMSPDNSLGKFFEEVESLKKELKELEKLHQSLRDSNEKSKALHSAQAVKDLRSRMDADVAAALKKAKLVKARLEALDRANEGSRAQPNCGPGSSSDRTRTSVVSGLRKKLKESMESFNKLREQISSEYRETVQRRYYTVTGENPDDKTIDLLISTGESETFLQKAIQQQGRASVMETIEEIQERHGAVKEIERNLNELHQVFLDMSVLVQAQGEHLDDIESHVARANSYVRGGVQQLTVARKHQKNTRKWTCFAIILLLIIIFIIVLPIVLRN* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0475 296 Gene3D - 27 161 - -
Aev06g0475 296 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 12 291 - -
Aev06g0475 296 Coils Coil 31 65 - -
Aev06g0475 296 Pfam SNARE domain 239 289 IPR000727 -
Aev06g0475 296 SMART tSNARE_6 196 263 IPR000727 -
Aev06g0475 296 Pfam Syntaxin 33 236 IPR006011 GO:0016020
Aev06g0475 296 CDD SNARE_syntaxin1-like 200 260 - -
Aev06g0475 296 MobiDBLite consensus disorder prediction 109 124 - -
Aev06g0475 296 MobiDBLite consensus disorder prediction 102 125 - -
Aev06g0475 296 PANTHER SYNTAXIN 12 291 IPR045242 -
Aev06g0475 296 Coils Coil 126 150 - -
Aev06g0475 296 Gene3D - 190 294 - -
Aev06g0475 296 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 201 263 IPR000727 -
Aev06g0475 296 SUPERFAMILY t-snare proteins 29 256 IPR010989 GO:0016020|GO:0016192
Aev06g0475 296 CDD SynN 31 188 IPR006011 GO:0016020
Aev06g0475 296 ProSitePatterns Syntaxin / epimorphin family signature. 207 246 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aev06g0475 296 SMART SynN_4 26 152 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0475 Aev-Chr6 3434369 3435730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0475 30 275 SNARE and Associated Proteins AT3G11820 71.545 4.61e-131 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0475 K08486 - gmx:100808718 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0475 06 3434369 3435730 Aev02g2059 02 22192573 22193974 PCT