Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0438 ATGGGACGCGTGAGGACGAAGACAGTGAAGAAATCGTCACGTCAGGTGATAGAGAGGTACTACTCGAAGATGACGCTGGACTTCCACACCAACAAGAAGGTTCTAGAAGAAGTTGCGCTCATCCCTTCGAAGAGGCTCCGCAACAAGATCGCGGGGTTCTCCACGCATCTCATGAAGCGCATTCAGAAGGGACCCGTCAGAGGCATCTCCCTCAAGCTCCAGGAGGAGGAGCGTGAGCGTCGCATGGATTTCGTCCCTGATGTCTCCGCCATCGACACCCACAACATTCAGGTCGACAAGGAGACCCTCGACATGCTCACTGCTCTTGGCATCTCCGACATGCCCGGTCTTGTCAAGGTTGAGCCTGTTCCTGTGCAGCAGCACCTTGGATTTGCACGAGGTGCTGGTGGTGCTCCCAGGAATAGGTTTTGA 432 0.5509 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKVLEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIDTHNIQVDKETLDMLTALGISDMPGLVKVEPVPVQQHLGFARGAGGAPRNRF* 144
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0438 143 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Aev06g0438 143 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Aev06g0438 143 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Aev06g0438 143 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Aev06g0438 143 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Aev06g0438 143 PANTHER 40S RIBOSOMAL PROTEIN S17 1 138 IPR001210 GO:0003735|GO:0005840|GO:0006412
Aev06g0438 143 PANTHER 40S RIBOSOMAL PROTEIN S17 1 138 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aev06g0438 Aev-Chr6 3141421 3141852 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0438 1 140 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 79.577 1.57e-76 222
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0438 K02962 - gmx:100785402 235.343