Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0431 ATGTCGACAGGCACAAACCCGCCGTACTCATCCTTCGCAGCAGAAACAACAGAGCCCTGGTGGCTTCCTGATGAAAATCAACAACAAGAATACCCCTTCCCAGTGGAGGAGCCAATCCGAGTTGAACCCATTCGGATATGGCCCCTCGACCAACCCCATCCCGTCCTCAACGTCAACAACCCTTATTACCAGCAAGAGCAGCAAGTTCATGGCGGTGGTGCTGTAGGAGACGACATGAAGGAGCTGATGTTCGAGAAGGCGCTGACACCGAGCGACGTCGGGAAACTGAACAGGCTGGTGATCCCGAAGAGCAAGGCGGAGGCGCACCTGCCAGCTGGCGCAGATGGTTACTCGCCCACACATGGGAAAGGGCTCATCCTGGATCTGGAGGATGAGAACGGCAAGTGGTGGAACTTCCGTTACTCCTACTGGCACAGCAGCCAGAGCTACGTCCTCACCAAAGGCTGGACCCGTTTCGTCAAGGAGAAGCGCCTCCAGGCTGGCGACGTCGTCATGTTCCACAGGCACCGTTTCCATCCCAACCGTTTCTTCGTCAGCTGGAGGCGCCGCCATCCCAGTGAGATCCCTCCCGCAAGGCCAAGGAGGAGCCACCACCCGGAAACAAGTGAAAGTGGTGATGGCGCTGCTGTTGACGTTGATGAGAATGAGAATGGCAATGACGACGACGACAACAACAGTGGGTATAACCATGAGAACAGTGAGAGTGTTGGTGTGGGGAGGGTGAGAGAGTTCTATCCGGAATTTCTTGCTCATCCTACGCAGCAGCAGGGGCAACACCTGTCTAACAATCCTCATCTTCATGCAGGTGAAGGGTCGGAGGCTCCGACAGCAGTGGACAACGGAACGGGTTCGGCATCAGGTTCGGGAGGGTGCTGGGTGTTCGGCGTGAACATTGGATGA 921 0.5635 MSTGTNPPYSSFAAETTEPWWLPDENQQQEYPFPVEEPIRVEPIRIWPLDQPHPVLNVNNPYYQQEQQVHGGGAVGDDMKELMFEKALTPSDVGKLNRLVIPKSKAEAHLPAGADGYSPTHGKGLILDLEDENGKWWNFRYSYWHSSQSYVLTKGWTRFVKEKRLQAGDVVMFHRHRFHPNRFFVSWRRRHPSEIPPARPRRSHHPETSESGDGAAVDVDENENGNDDDDNNSGYNHENSESVGVGRVREFYPEFLAHPTQQQGQHLSNNPHLHAGEGSEAPTAVDNGTGSASGSGGCWVFGVNIG* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0431 306 MobiDBLite consensus disorder prediction 259 296 - -
Aev06g0431 306 MobiDBLite consensus disorder prediction 214 228 - -
Aev06g0431 306 CDD B3_DNA 83 189 IPR003340 GO:0003677
Aev06g0431 306 Pfam B3 DNA binding domain 84 190 IPR003340 GO:0003677
Aev06g0431 306 ProSiteProfiles B3 DNA-binding domain profile. 84 191 IPR003340 GO:0003677
Aev06g0431 306 SMART B3_2 84 191 IPR003340 GO:0003677
Aev06g0431 306 MobiDBLite consensus disorder prediction 1 27 - -
Aev06g0431 306 Gene3D - 75 198 IPR015300 -
Aev06g0431 306 SUPERFAMILY DNA-binding pseudobarrel domain 82 194 IPR015300 -
Aev06g0431 306 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0156000 64 251 - -
Aev06g0431 306 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 64 251 IPR044800 GO:0003700
Aev06g0431 306 MobiDBLite consensus disorder prediction 194 243 - -
Aev06g0431 306 MobiDBLite consensus disorder prediction 194 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0431 Aev-Chr6 3097555 3099397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0431 77 190 RAV Transcription Factor Family AT5G06250 60.833 4.91e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev06g0431 B3 2.5e-27 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0431 - - ahf:112758698 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0431 06 3097555 3099397 Aev06g0431 06 3097555 3099397 ECH
Aev06g0431 06 3097555 3099397 Aev02g2115 02 22637419 22640010 PCT