Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0427 ATGGCGGCTATTATCAGAAGAATCATTGGGTCCAACAAAACCTTGTCCCAACCTTCTCTTCTCAATTTTCGCAGGGCTATTGCTTTCAAGCTCTTCGTTGGAGGATTGTCCGTGTACACGACAGAGACAGGATTGTCAGATGCTTTCTCTAATTGTGGACAAGTTATTGAAGCTAAAATTGTAACAGACAGGGTATCAGAGAGATCTAGAGGGTTTGGATTTGTCACTTTTGCATCACATGATGAGGCTGAGAATGCCATTTCACAGATGAATGGGAAGGCACTAAATGGCCGTGTTATCTTTGTTGATTATGCAAAACCCACTTCCAATACTGGTGGAATGCCAATTGCAAGAGGCCCACCTGAGCAACCTGAACCATCAGTTGAAAGTTGA 393 0.4326 MAAIIRRIIGSNKTLSQPSLLNFRRAIAFKLFVGGLSVYTTETGLSDAFSNCGQVIEAKIVTDRVSERSRGFGFVTFASHDEAENAISQMNGKALNGRVIFVDYAKPTSNTGGMPIARGPPEQPEPSVES* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0427 130 MobiDBLite consensus disorder prediction 111 130 - -
Aev06g0427 130 PANTHER TRANSFORMER-2-RELATED 1 123 - -
Aev06g0427 130 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 31 100 IPR000504 GO:0003723
Aev06g0427 130 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL-LIKE 1 123 - -
Aev06g0427 130 SUPERFAMILY RNA-binding domain, RBD 29 113 IPR035979 GO:0003676
Aev06g0427 130 SMART rrm1_1 30 103 IPR000504 GO:0003723
Aev06g0427 130 Gene3D - 23 125 IPR012677 -
Aev06g0427 130 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 29 107 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0427 Aev-Chr6 3068727 3070246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0427 31 109 Eukaryotic Initiation Factors Gene Family AT2G23350 31.646 2.97e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0427 - - lja:Lj1g3v4721740.1 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0427 06 3068727 3070246 Aev06g0427 06 3068727 3070246 ECH