Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0409 ATGGATGCATCAAATCCTGCAGTCTTTGTCAATGCAGAACTGCTGCACTTCTATGTTGGAAGGAGGGTTCGGGCAGTGATGCAGGTCGTGCGATCCGACAATGGAATTGTCATCGGAAAATCAACAGATGATAAGCAGCTAGTTGTAAAAGGACAATCTCCACATGTTCCTCTTACAACTTTTGTAGAAGTTATTGGTATTGTTGACAACGATAAATCCATTCGTGCTGAGATATGGACCAATTTTGGTGATGCAATTGATATGGTAAGCTTCAATAAGCTTTGTCAGCTAGCAAATGGAGAATTCAAGCACTTGTTTGTGTGA 324 0.4105 MDASNPAVFVNAELLHFYVGRRVRAVMQVVRSDNGIVIGKSTDDKQLVVKGQSPHVPLTTFVEVIGIVDNDKSIRAEIWTNFGDAIDMVSFNKLCQLANGEFKHLFV* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0409 107 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 107 - -
Aev06g0409 107 SUPERFAMILY Nucleic acid-binding proteins 6 106 IPR012340 -
Aev06g0409 107 Pfam Replication factor A protein 3 1 103 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev06g0409 107 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 107 - -
Aev06g0409 107 CDD RPA3 6 99 - -
Aev06g0409 107 Gene3D - 1 107 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0409 Aev-Chr6 2980414 2980926 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0409 1 107 Core DNA Replication Machinery Family AT4G18590 65.421 2.97e-51 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0409 K10740 - gmx:100306641 174.096