LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g0391	ATGGTGGTGCAGGAAGCAGAGATGATGAACAACTCAGCAGAGTTAGGAGAAGTGGAATCGCAGCTCCAAACAGATGAGCAATTGTTACAAGAAGCAGCGAACAAGGACAGTCACAATCATGCGCTTTCATCTCTGGGAAGGCAATCATCCATCTACTCTCTGACACTGGACGAGTTCCAGCACACGCTCTGCGACACTGGCAAGAACTTCGGCTCCATGAACATGGACGAGTTCCTCAGCAGCATCTGGAACGCCGAAGAGAACCAACAAGCCTCCAACGCCATCATCTCTCTCAACCACCAACAACTACCTTCTTCCGCTGATAACAACAATAACAATCATAATAAAGGGATGGCGACCATAAGGAAGCAACCCAGCCTCCCTCGCCAAGGCTCATTATCCCTTCCTGCGCCTCTCTGCAGGAAAACTGTTGAGGAAGTTTGGTCTGAGATACACAAAGGGCAGCAGAACCAGCAACAGAATGATCACATTCAGAGTAATAATAACAGTATTAATGGGAATGGGAATGGGAATGGGAGTGGTAGTAGTGTTCTGAATAATAATAATAATAATAATGGTAATACCGAAGCTGCCCCTCGCCAACCCACTTTTGGGGAGATGACTTTGGAGGATTTCTTGGTCAAAGCAGGGGTTGTTAGGGAACCGCCTGTCATTGGCAGTGGTGGAGTGGCAGGGAATGTGGTTGCGCCGCCTTATCCCCCGGTGGCTCAGGGATCAGCTGGGGAGAGGGATGGTAGTGGTGGTGGGTATGGTGTTGGGTTGTGCTACGGAGGGAGGGTGGTAAATAATGGAGCAGGGGGTGGGTATGGGCCCCCTCCCACAATCGCGGGGATGGGTGGGCCTCTGAGCCCGGCTTCATCGGATGGGGTTGGGCCGGGTGAGGCCCAGTTTGGGGTTGAGATGGGAGTGTTGAGGGGAAGGAAGAGGATGGTGGATGGTCCTGTGGAGAAGGTGGTTGAGAGAAGGCAGAGGAGGATGATCAAGAACAGAGAATCTGCAGCAAGATCTAGAGCCAGAAAACAGGCATACACAGTTGAATTAGAAGCAGAACTGAACCAGCTAAGAGAAGAGAACACCCAACTCAAACAAGCGCTGGCCGAGCTCGAGAGGAGAAGAAGGCAACAGTGTTTTGAGGAAATGAACGCGAGAGTTCAAACCAAAACTCAGAAGGCGATAGAGAAATTGAGAGCGCTGAGAAGGAATCTGAGTTGTCCTTTGTGA	1242	0.5072	MVVQEAEMMNNSAELGEVESQLQTDEQLLQEAANKDSHNHALSSLGRQSSIYSLTLDEFQHTLCDTGKNFGSMNMDEFLSSIWNAEENQQASNAIISLNHQQLPSSADNNNNNHNKGMATIRKQPSLPRQGSLSLPAPLCRKTVEEVWSEIHKGQQNQQQNDHIQSNNNSINGNGNGNGSGSSVLNNNNNNNGNTEAAPRQPTFGEMTLEDFLVKAGVVREPPVIGSGGVAGNVVAPPYPPVAQGSAGERDGSGGGYGVGLCYGGRVVNNGAGGGYGPPPTIAGMGGPLSPASSDGVGPGEAQFGVEMGVLRGRKRMVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENTQLKQALAELERRRRQQCFEEMNARVQTKTQKAIEKLRALRRNLSCPL*	414

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev06g0391	413	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	331	346	IPR004827	GO:0003700\|GO:0006355
	Aev06g0391	413	MobiDBLite	consensus disorder prediction	151	201	-	-
	Aev06g0391	413	MobiDBLite	consensus disorder prediction	103	136	-	-
	Aev06g0391	413	MobiDBLite	consensus disorder prediction	103	131	-	-
	Aev06g0391	413	PANTHER	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	14	227	IPR043452	GO:0003700\|GO:0045893
	Aev06g0391	413	CDD	bZIP_plant_BZIP46	328	382	-	-
	Aev06g0391	413	PANTHER	ABA RESPONSE ELEMENT-BINDING FACTOR	14	227	IPR029803	GO:0003700\|GO:0005634\|GO:0009737\|GO:0045893
	Aev06g0391	413	Coils	Coil	15	35	-	-
	Aev06g0391	413	Gene3D	-	326	377	-	-
	Aev06g0391	413	SUPERFAMILY	Leucine zipper domain	328	377	IPR046347	GO:0003700\|GO:0006355
	Aev06g0391	413	Coils	Coil	344	381	-	-
	Aev06g0391	413	SMART	brlzneu	324	388	IPR004827	GO:0003700\|GO:0006355
	Aev06g0391	413	MobiDBLite	consensus disorder prediction	1	21	-	-
	Aev06g0391	413	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	326	378	IPR004827	GO:0003700\|GO:0006355
	Aev06g0391	413	Coils	Coil	388	408	-	-
	Aev06g0391	413	Pfam	bZIP transcription factor	328	378	IPR004827	GO:0003700\|GO:0006355
	Aev06g0391	413	PANTHER	ABA RESPONSE ELEMENT-BINDING FACTOR	228	412	IPR029803	GO:0003700\|GO:0005634\|GO:0009737\|GO:0045893
	Aev06g0391	413	PANTHER	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	228	412	IPR043452	GO:0003700\|GO:0045893

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g0391	Aev-Chr6	2901590	2903353	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g0391	39	383	bZIP Transcription Factor Family	AT2G36270	51.106	5.62e-102	308

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Aev06g0391		bZIP_1	1.8e-11	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g0391	K14432		-	gmx:100818567	399.053

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev06g0391	06	2901590	2903353	Aev06g0391	06	2901590	2903353	ECH
	Aev06g0391	06	2901590	2903353	Aev02g2167	02	22933794	22935456	PCT