Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0370 ATGAAGGTCATCGCCGCCTACTTGCTCGCCGTCCTCGGTGGCAACAACTCCCCTTCCGCCGGTGACATCAAGGGAATCCTCAGCTCCGTTGGAGCTGAAGCGGACGATGACACGATCACACTCCTTCTGTCTGAAGTGAAAGGCAAAGACATTGCAGAAGTCATTGCCGCCGGTAGGGAGAAGCTTGCATCGGTTCCAGCTGGTGGTGGTGGCGCCGTCGCTGTGGCCGCTGCCCCTAGCGGAGGTGGTGGTGCAGCTCCTGCAGCCGCCGAATCTAAGAAGGAGGAGAAGGTCGAAGAGAAGGAGGAATCAGATGACGATATGGGATTCAGTCTCTTCGAGTAA 345 0.5739 MKVIAAYLLAVLGGNNSPSAGDIKGILSSVGAEADDDTITLLLSEVKGKDIAEVIAAGREKLASVPAGGGGAVAVAAAPSGGGGAAPAAAESKKEEKVEEKEESDDDMGFSLFE* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0370 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Aev06g0370 114 Gene3D - 1 59 IPR038716 -
Aev06g0370 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 2 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Aev06g0370 114 MobiDBLite consensus disorder prediction 79 114 - -
Aev06g0370 114 Pfam 60s Acidic ribosomal protein 17 113 - -
Aev06g0370 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 2 114 - -
Aev06g0370 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0370 Aev-Chr6 2763446 2764076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0370 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 65.789 9.36e-31 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0370 K02943 - sind:105161773 121.709