Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0356 ATGGAAATGGAGGATCATCATCATCATCACCACCACCATCATCATAATAACCACCAACAACAACAACAACAGCAACAGCAGTATGGCATAACTGATCTAAGGCAGCTAGTGAATGGAGTAGCAGCAGCAAGGTCCACTCATCATTTCCCTGCTTCATCAATACCGCCAGCAGCACATCCAACGGCGGAGCTATTCCCCGGACACCCGAATCTGACGGCTCCCACACAGCAGCACCACTACGAGATGATGATGTTTGGTCGTCAAGTAGCAGACATAATGCCTCCTCGCTGTCTTCATGAATTCGCATCCACGGACGCTGCTGCTGCTGCACCCACCACCACTAACACTAGCATCGCCGTGGCCACCACTCCCACCACAACCACTAGCGCTTCCACTCCTCCGCTCAGTGGCTTAGGTGGAGACGCTTCCACCGGAAGATGGCCCAGGCAGGAGACTCTTACTCTTCTTGAGATCAGATCTCGCCTTGACCTCAAATTCAAAGAGGCTAATCAAAAGGGCCCCTTATGGGACGAAGTTTCTAGGATCATGTCTGAAGAGCATGGATACCAAAGGAGTGGGAAAAAGTGCAGGGAGAAATTCGAGAACCTTTACAAGTATTACAAGAAGACAAAGGAGGGCAAAGCTGGAAGACAAGATGGGAAGCACTACAGATTCTTTCGCCAGCTTGAAGCCTTATACGGTGAAAACAGCAGTAACACTGCCTCCGCACCTGATACCACCAGCATCCGTTACCACCAAACAACCACCACCAATCAAGACATGCTCCTCATTCATCATCATCACAAGCAGCATTGTGATAGCCTCAGCCTCACTAACTCCACTGACTTGGACACATCCTCGTCTGATGACAATGACGACGAGCATGTCAACCACAGCCATGATGATGATAATCAGCAGGGGGGAGGAGGGGGTCTCAATAATAATGGCTCCGTCGAGAAGATCATCAGGAGGAAGCAGAGGGGTGGCAGTGGGAGGAGCTGGAAGGTGAAGATCAAGGACTTCATTGATTTACAGATGAGGAAGCTGGTTGAGAAGCAAGAGGAGTGGCTCGACAAGCTGATGAAGACGCTGGAGCAGAAGGAGAAGGAGAGGGCCTTGCGGGAGGAGGAGTGGAGGAGGCAAGAGGCAGCGAGGTTGGAGAAGGAGCACAAGTTTTGGGCTAAAGAGAGATCATGGATTGAAGCCAGGGATGCTGCTCTTATGGACGCACTGCAGAAGCTAACAGGAGGAAGTGATCAGGCCAAGGTGATGATGATGATGAATAATGAGTCTCCTGATGAGGGGATAGTTGCTGCTGCTGGGATTCAAAGCCAGAATAATAACAACAATGAAGATGGAAGTAGTGAAAGCTGGCCAGAGCCTGAGATTGCAAGGCTTCTTCAGCTGAGAGCTGAGATGGTGGAAACAAGGTCGTTTAGACAAGGTGGTGGTTGTTCAGAGGAGGCTATGTGGGAGGAAGTAGCTTCCAAAATGGCTTGTTTTGGATATGAGAGGAGTGCTTTGATGTTGAAGGATAAATGGGAAAGTATAAGCAGCTATCATCATCAAAATCCAAGGAGTAGTAGTAACAATAATATAATTGGTGCACACAAGGAAGGGAACAAGAAGAGGAAGGACAACAACTCAAGAACTTGTTTTTACTTCGATGGCAATGAGCAGCTGCAGCCCTCTCTATATAATCAAGGGAGCGGTGGTGGCGGCCATGGAGATGGAGGAGGATTCTGTGATATCAATGACCAGAGGCAACAGCAACAGACAAATGACGGTTCTTCACCTTCGAATTCCAATGTTGGAAATGCTGCTGACACCTGTTTTCCCTTCTTGATGACTGAAGGAGGGACTTTGTGGGACAATTACAGCTTAAAGCTTGATAAGGCAAACCAAAATCAGTAG 1914 0.4864 MEMEDHHHHHHHHHHNNHQQQQQQQQQYGITDLRQLVNGVAAARSTHHFPASSIPPAAHPTAELFPGHPNLTAPTQQHHYEMMMFGRQVADIMPPRCLHEFASTDAAAAAPTTTNTSIAVATTPTTTTSASTPPLSGLGGDASTGRWPRQETLTLLEIRSRLDLKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENSSNTASAPDTTSIRYHQTTTTNQDMLLIHHHHKQHCDSLSLTNSTDLDTSSSDDNDDEHVNHSHDDDNQQGGGGGLNNNGSVEKIIRRKQRGGSGRSWKVKIKDFIDLQMRKLVEKQEEWLDKLMKTLEQKEKERALREEEWRRQEAARLEKEHKFWAKERSWIEARDAALMDALQKLTGGSDQAKVMMMMNNESPDEGIVAAAGIQSQNNNNNEDGSSESWPEPEIARLLQLRAEMVETRSFRQGGGCSEEAMWEEVASKMACFGYERSALMLKDKWESISSYHHQNPRSSSNNNIIGAHKEGNKKRKDNNSRTCFYFDGNEQLQPSLYNQGSGGGGHGDGGGFCDINDQRQQQQTNDGSSPSNSNVGNAADTCFPFLMTEGGTLWDNYSLKLDKANQNQ* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0356 637 Coils Coil 350 377 - -
Aev06g0356 637 ProSiteProfiles Myb-like domain profile. 450 518 IPR001005 -
Aev06g0356 637 MobiDBLite consensus disorder prediction 124 138 - -
Aev06g0356 637 MobiDBLite consensus disorder prediction 551 569 - -
Aev06g0356 637 CDD GT1 458 520 - -
Aev06g0356 637 MobiDBLite consensus disorder prediction 584 605 - -
Aev06g0356 637 MobiDBLite consensus disorder prediction 279 318 - -
Aev06g0356 637 Gene3D - 458 523 - -
Aev06g0356 637 Gene3D - 147 209 - -
Aev06g0356 637 MobiDBLite consensus disorder prediction 124 146 - -
Aev06g0356 637 Pfam Myb/SANT-like DNA-binding domain 146 232 IPR044822 -
Aev06g0356 637 Pfam Myb/SANT-like DNA-binding domain 456 524 IPR044822 -
Aev06g0356 637 ProSiteProfiles Myb-like domain profile. 139 204 IPR001005 -
Aev06g0356 637 MobiDBLite consensus disorder prediction 520 605 - -
Aev06g0356 637 PANTHER - 55 621 - -
Aev06g0356 637 MobiDBLite consensus disorder prediction 520 536 - -
Aev06g0356 637 CDD GT1 146 211 - -
Aev06g0356 637 MobiDBLite consensus disorder prediction 1 27 - -
Aev06g0356 637 SMART sant 143 206 IPR001005 -
Aev06g0356 637 SMART sant 454 520 IPR001005 -
Aev06g0356 637 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 55 621 - -
Aev06g0356 637 MobiDBLite consensus disorder prediction 54 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0356 Aev-Chr6 2626222 2629121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0356 22 632 Trihelix Transcription Factor Family AT5G03680 41.463 1.75e-129 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aev06g0356 Myb_DNA-bind_4 6.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0356 - - gmx:100813245 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0356 06 2626222 2629121 Aev06g0356 06 2626222 2629121 ECH